API for spp
ChIP-Seq Processing Pipeline

Global functions
add.broad.peak.regions Man page
densum Man page
find.binding.positions Man page
get.binding.characteristics Man page
get.broad.enrichment.clusters Man page
get.conservative.fold.enrichment.profile Man page
get.conservative.fold.enrichment.profile2 Man page
get.mser Man page
get.mser.interpolation Man page
get.smoothed.enrichment.mle Man page
get.smoothed.enrichment.mle2 Man page
get.smoothed.tag.density Man page
output.binding.results Man page
points_within Man page
read.arachne.tags Man page
read.bam.tags Man page
read.bin.maqmap.tags Man page
read.bowtie.tags Man page
read.eland.tags Man page
read.helicos.tags Man page
read.maqmap.tags Man page
read.meland.tags Man page
read.short.arachne.tags Man page
read.tagalign.tags Man page
remove.local.tag.anomalies Man page
select.informative.tags Man page
spp Man page
spp-package Man page
write.broadpeak.info Man page
write.narrowpeak.binding Man page
writewig Man page
spp documentation built on May 30, 2019, 5:03 p.m.