squash: Color-Based Plots for Multivariate Visualization
Version 1.0.7

Functions for color-based visualization of multivariate data, i.e. colorgrams or heatmaps. Lower-level functions map numeric values to colors, display a matrix as an array of colors, and draw color keys. Higher-level plotting functions generate a bivariate histogram, a dendrogram aligned with a color-coded matrix, a triangular distance matrix, and more.

Browse man pages Browse package API and functions Browse package files

AuthorAron C. Eklund
Date of publication2015-08-02 08:23:24
MaintainerAron C. Eklund <eklund@cbs.dtu.dk>
LicenseArtistic-2.0
Version1.0.7
URL http://www.cbs.dtu.dk/~eklund/squash/
Package repositoryView on CRAN
InstallationInstall the latest version of this package by entering the following in R:
install.packages("squash")

Man pages

cimage: Draw a matrix of colored rectangles
cmap: Apply a color map to numeric data
colorgram: Draw a colorgram (heatmap) of a matrix
ColorPalettes: Bonus color palettes
corrogram: Draw a color-coded triangular matrix of pairwise correlations
dendromat: Plot a dendrogram with a colorgram underneath
diamond: Draw diamonds
distogram: Draw a color-coded triangular distance matrix
hist2: Bivariate histogram
hkey: Add a color key to a plot
makecmap: Generate a color map from numeric values to colors
matapply: Apply a function over z coordinates, binned by their x, y...
prettyInt: Pretty breakpoints
savemat: Save a matrix as a raster image file
squashgram: Visualize a function of z coordinates, binned by x, y...
trianglegram: Draw a color-coded triangular matrix
xyzmat2xyz: Convert (x, y, zmat) coordinates to (x, y, z) coordinates
xyzmat.coords: Extract (x, y, z) coordinates, where z is a matrix

Functions

blueorange Man page
bluered Man page
cimage Man page Source code
cmap Man page Source code
colorgram Man page Source code
coolheat Man page
corrogram Man page Source code
darkbluered Man page
dendromat Man page Source code
diamond Man page Source code
distogram Man page Source code
extendrange2 Source code
grayscale Man page Source code
greyscale Man page
heat Man page
hist2 Man page Source code
hkey Man page Source code
jet Man page
makecmap Man page Source code
matapply Man page Source code
prettyInt Man page Source code
prettyLog Man page Source code
rainbow2 Man page Source code
savemat Man page Source code
squashgram Man page Source code
trianglegram Man page Source code
vkey Man page Source code
xyzmat.coords Man page Source code
xyzmat2xyz Man page Source code

Files

NAMESPACE
NEWS
R
R/distogram.R
R/squash.R
README.md
MD5
DESCRIPTION
man
man/trianglegram.Rd
man/diamond.Rd
man/xyzmat2xyz.Rd
man/dendromat.Rd
man/distogram.Rd
man/corrogram.Rd
man/squashgram.Rd
man/cimage.Rd
man/hist2.Rd
man/hkey.Rd
man/ColorPalettes.Rd
man/makecmap.Rd
man/xyzmat.coords.Rd
man/matapply.Rd
man/prettyInt.Rd
man/savemat.Rd
man/colorgram.Rd
man/cmap.Rd
squash documentation built on May 19, 2017, 4:06 p.m.