ssize.fdr: Sample Size Calculations for Microarray Experiments

This package contains a set of functions that calculates appropriate sample sizes for one-sample t-tests, two-sample t-tests, and F-tests for microarray experiments based on desired power while controlling for false discovery rates. For all tests, the standard deviations (variances) among genes can be assumed fixed or random. This is also true for effect sizes among genes in one-sample and two sample experiments. Functions also output a chart of power versus sample size, a table of power at different sample sizes, and a table of critical test values at different sample sizes.

Author
Megan Orr, Peng Liu
Date of publication
2015-02-22 07:59:58
Maintainer
Megan Orr <megan.orr@ndsu.edu>
License
GPL-3
Version
1.2

View on CRAN

Man pages

ssize.F
Sample Size Calculations for Multi-Sample Microarray...
ssize.fdr-package
Sample Size Calculations for Microarray Experiments
ssize.oneSamp
Sample Size Calculations for One-Sample Microarray...
ssize.oneSampVary
Sample Size Calculations for One-Sample Microarray...
ssize.twoSamp
Sample Size Calculations for Two-Sample Microarray...
ssize.twoSampVary
Sample Size Calculations for Two-Sample Microarray...

Files in this package

ssize.fdr
ssize.fdr/NAMESPACE
ssize.fdr/R
ssize.fdr/R/ssize.twoSampVary.r
ssize.fdr/R/ssize.oneSampVary.r
ssize.fdr/R/ssize.F.r
ssize.fdr/R/ssize.oneSamp.r
ssize.fdr/R/ssize.Fvary.r
ssize.fdr/R/ssize.twoSamp.r
ssize.fdr/R/ssize.fdr-internal.R
ssize.fdr/MD5
ssize.fdr/DESCRIPTION
ssize.fdr/man
ssize.fdr/man/ssize.oneSampVary.Rd
ssize.fdr/man/ssize.twoSampVary.Rd
ssize.fdr/man/ssize.fdr-package.Rd
ssize.fdr/man/ssize.twoSamp.Rd
ssize.fdr/man/ssize.Fvary.rd
ssize.fdr/man/ssize.oneSamp.Rd
ssize.fdr/man/ssize.F.Rd