stLMM
Bayesian Spatial and Space-Time Linear Mixed Models

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Functions
279
Source code
46
Man pages
14
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stLMM: Bayesian Spatial and Space-Time Linear Mixed Models
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API

API for stLMM
Bayesian Spatial and Space-Time Linear Mixed Models

Global functions
.hilbert_rot Source code
.hilbert_xy2d Source code
`%||%` Source code Source code
ar1 Man page
ar1_term_defaults Source code
as_mcmc Man page Source code
as_mcmc.stLMM Man page Source code
as_mcmc.stLMM_chains Man page Source code
as_mcmc.stLMM_recovery Man page Source code
as_mcmc.stLMM_recovery_chains Man page Source code
as_samples Man page Source code
as_samples.matrix Source code
as_samples.stLMM Source code
as_samples.stLMM_chains Source code
as_samples.stLMM_fitted_chains Source code
as_samples.stLMM_prediction Source code
as_samples.stLMM_prediction_chains Source code
as_samples.stLMM_recovery Source code
as_samples.stLMM_recovery_chains Source code
beta_dist Man page Source code
build_ar1_components Source code
build_car_components Source code
build_car_time_components Source code
build_cor_model_registry Source code
build_dagar_components Source code
build_dagar_time_components Source code
build_existing_support_prediction_backend Source code
build_gp_components Source code
build_graph_key Source code
build_group_ig_residual_model Source code
build_group_residual_model Source code
build_iid_components Source code
build_iid_design Source code
build_nngp_components Source code
build_obs_index Source code
build_obs_index_with_n_node Source code
build_prediction_Z Source code
build_process_components Source code
build_resid_components Source code
build_scaled_residual_model Source code
car Man page
car_connected_components Source code
car_graph Man page Source code
car_graph_key_tag Source code
car_graph_signature Source code
car_term_defaults Source code
car_time Man page
car_time_term_defaults Source code
chain_diagnostics Source code
collect_parameter_summaries Source code
compute_graph_order Source code
compute_nngp_order Source code
connect_car_components_nearest Source code
coordinate_row_keys Source code
dagar Man page
dagar_graph_defaults Source code
dagar_time Man page
default_iid_names Source code
default_process_names Source code
drop_burn_block Source code
drop_burn_matrix Source code
drop_burn_mcmc Source code
drop_burn_samples Source code
eval_process_param Source code
eval_residual_expr Source code
eval_residual_variance Source code
expand_residual_group_values Source code
extract_process_coords Source code
filter_sample_blocks Source code
finish_prediction_samples Source code
fitted.stLMM Man page Source code
fitted.stLMM_recovery_chains Source code
fitted_residual_sd_samples Source code
fixed Man page Source code
fixed_parameter_numeric Source code
flat Man page Source code
format_model_formula Source code
gamma_dist Man page Source code
get_cor_models Man page Source code
get_residual_control_block Source code
gp Man page
gp_correlation Source code
gp_correlation_matrix Source code
gp_covariance_matrix Source code
gp_graph_defaults Source code
gp_term_defaults Source code
graph_plot_arrow_backoff Source code
graph_plot_edges Source code
graph_plot_layout Source code
graph_plot_requires Source code
half_normal Man page Source code
half_t Man page Source code
hilbert_order Source code
ig Man page Source code
iid Man page
is_fixed_parameter Source code
is_iid_term Source code
is_process_term Source code
is_resid_term Source code
is_sf_geometry_column Source code
is_space_time_cov_model Source code
log_lik Man page Source code
log_lik.stLMM Man page Source code
log_lik.stLMM_chains Man page Source code
log_lik.stLMM_recovery Man page Source code
log_lik.stLMM_recovery_chains Man page Source code
log_normal Man page Source code
make_ar1_graph Source code
make_car_graph Source code
make_car_time_graph Source code
make_dagar_graph Source code
make_dagar_time_graph Source code
make_gp_graph Source code
make_nngp_graph Source code
make_process_term Source code
make_stLMM_prior Source code
match_unique_rows Source code
maxmin_order Source code
mkNNIndx Source code
mkNNIndxBrute Source code
nngp Man page
nngp_graph_defaults Source code
nngp_prediction_neighbors Source code
nngp_prediction_vecchia_graph Source code
nngp_term_defaults Source code
normal Man page Source code
normalize_car_model Source code
normalize_car_time_model Source code
parse_iid_call Source code
parse_process_call Source code
plot.stLMM Man page Source code
plot.stLMM_car_graph Man page Source code
plot.stLMM_chains Man page Source code
plot.stLMM_graph Man page Source code
plot.stLMM_prediction Man page Source code
plot.stLMM_prediction_chains Man page Source code
plot.stLMM_recovery Man page Source code
plot.stLMM_recovery_chains Man page Source code
plot_draw_index Source code
plot_graph_base Source code
pointwise_log_lik_from_eta Source code
posterior_summary_table Source code
predict.stLMM Man page Source code
predict.stLMM_chains Man page Source code
predict.stLMM_recovery Man page Source code
predict.stLMM_recovery_chains Man page Source code
prediction_nb_size Source code
prediction_residual_sd Source code
prediction_residual_sd_samples Source code
prediction_sample_matrix Source code
prediction_trials Source code
print.stLMM Man page Source code
print.stLMM_chains Man page Source code
print.stLMM_prediction Man page Source code
print.stLMM_prediction_chains Source code
print.stLMM_recovery Man page Source code
print.stLMM_recovery_chains Source code
print.summary_stLMM Source code
print.summary_stLMM_chains Source code
print.summary_stLMM_prediction Source code
print.summary_stLMM_prediction_chains Source code
print.summary_stLMM_recovery Source code
print.summary_stLMM_recovery_chains Source code
process_graph_defaults Source code
process_sigma_sq_draws Source code
recover Man page Source code
recover.stLMM Man page Source code
recover.stLMM_chains Man page Source code
require_loo Source code
resid Man page Source code
resolve_gp_spec Source code
resolve_n_omp_threads Source code
resolve_nngp_spec Source code
resolve_prediction_st_scale Source code
resolve_st_scale Source code
sample_available_index Source code
sample_draw_index Source code
sample_matrix Source code
sample_parameter_names Source code
samples_data_frame Source code
samples_make_names Source code
samples_matrix_block Source code
samples_w_blocks Source code
scale_nngp_search_coords Source code
simulate_ar1_prediction_nodes Source code
simulate_gp_prediction_nodes Source code
simulate_nngp_prediction_nodes Source code
simulate_nngp_prediction_nodes_joint Source code
simulate_nngp_prediction_nodes_vecchia Source code
sort_unique_matrix_rows Source code
split_top_level Source code
split_top_level_colon Source code
stLMM Man page Source code
stLMM-priors Man page
stLMM-terms Man page
stLMM_parameter_samples Source code
stLMM_priors Man page
stLMM_terms Man page
stlmm_progress Source code
stunitco Man page
subset_process_term_observed Source code
summary.stLMM Man page Source code
summary.stLMM_chains Man page Source code
summary.stLMM_prediction Man page Source code
summary.stLMM_prediction_chains Source code
summary.stLMM_recovery Man page Source code
summary.stLMM_recovery_chains Man page Source code
uniform Man page Source code
unique_coordinate_rows Source code
unstack_w_samples Source code
validate_burn Source code
validate_fixed_residual_variance Source code
validate_iid_variable_name Source code
validate_ordering_vector Source code
validate_summary_parameters Source code
validate_thin Source code
waic Man page Source code
waic.default Man page Source code
waic.stLMM Man page Source code
waic.stLMM_chains Man page Source code
waic.stLMM_recovery Man page Source code
waic.stLMM_recovery_chains Man page Source code
stLMM documentation built on Nov. 12, 2026, 1:07 a.m.

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