Man pages for stagedtrees
Staged Event Trees
| as_adj_matrix | Convert to an adjacency matrix |
| as_bn | Convert to a 'bnlearn' object |
| as_parentslist | Obtain the equivalent DAG as list of parents |
| as_sevt | Coerce to sevt |
| Asym | Asym dataset |
| barplot.sevt | Bar plots of stage probabilities |
| ceg | Chain event graph (CEG) |
| check_sevt | Check sevt objects |
| cid | Context specific interventional discrepancy |
| ci_matrices | Conditional independences matrices of stages |
| compare_stages | Compare two staged event tree |
| confint.sevt | Confidence intervals for staged event tree parameters |
| covid_patients | Trajectories of hospitalized SARS-CoV-2 patients |
| depsubtree | Extract dependency subtree |
| distance_mat_stages | Compute the distance matrix |
| edge | Plot an edge |
| erase_fit | Erase the sevt fit |
| expand_prob | Expand probabilities of a staged event tree |
| find_stage | Find the stage of the path |
| full_indep | Full and independent staged event tree |
| generate_linear_dataset | Generate a random binary dataset for classification |
| generate_random_dataset | Generate a random binary dataset |
| generate_xor_dataset | Generate a xor dataset |
| get_stage | Get stage or path |
| igraph-conversion | 'igraph' conversion |
| inclusions_stages | Inclusions of stages |
| join_positions | join positions in a staged tree model |
| join_stages | Join stages |
| join_unobserved | Join situations with no observations |
| logLik.sevt | Log-Likelihood of a staged event tree |
| lr_test | Likelihood Ratio Test for staged trees models |
| make_ctables | Distribute counts along tree |
| new_label | New label |
| node | Plot a node |
| noisy_xor | noisy xor function |
| path_probability | Compute probability of a path from root |
| PhDArticles | PhD Students Publications |
| plot.ceg | igraph's plotting for CEG |
| plot.sevt | Plot method for staged event trees |
| Pokemon | Pokemon Go Users |
| predict.sevt | Predict method for staged event tree |
| print.parentslist | Print a parentslist object |
| print.sevt | Print a staged event tree |
| prob | Probabilities for a staged event tree |
| probdist | Distances between probabilities |
| random_parentslist | Generate a random 'parentslist' object (DAG) |
| random_sevt | Generate a random (fitted) sevt |
| rename_stage | Rename stage(s) in staged event tree |
| sample_from | Sample from a staged event tree |
| search_best | Optimal Order Search |
| search_greedy | Greedy Order Search |
| sevt | Staged event tree (sevt) class |
| sevt_add | Add a variable to a staged event tree |
| sevt_df | Number of parameters of a staged event tree |
| sevt_fit | Fit a staged event tree |
| sevt_nvar | Number of variables |
| sevt_simplify | Simplify a staged tree model |
| sevt_varnames | Variable names |
| split_stage_random | Split randomly a stage |
| stagedtrees | Staged event trees. |
| stages | The stages of a staged event tree |
| stages_bhc | Backward hill-climbing |
| stages_bhcr | Backward random hill-climbing |
| stages_bj | Backward joining of stages |
| stages_csbhc | Context-specific Backward hill-climbing |
| stages_fbhc | Fast backward hill-climbing |
| stages_hc | Hill-climbing |
| stages_hclust | Learn a staged tree with hierarchical clustering |
| stages_kmeans | Learn a staged tree with k-means clustering |
| stages_simplebhc | Backward hill-climbing for simple staged trees |
| stndnaming | Standard renaming of stages |
| subtree | Extract subtree |
| summary.sevt | Summarizing staged event trees |
| text.sevt | Add text to a staged event tree plot |
| trajectories | Hospital trajectories |
| tree_idx | return path index |
| tree_string | Tree string |
| uni_idx | Unique id from named list |
| which_class | Find maximum value |
| write_tikz | Export the staged tree or CEG graph to tikz |
