NcVarReader: NetCDF variable reader for 'startR'

In startR: Automatically Retrieve Multidimensional Distributed Data Sets

NetCDF variable reader for 'startR'

Description

This is an auxiliary variable reader function for NetCDF files, intended for use as parameter 'file_var_reader' in a Start() call. It complies with the input/output interface required by Start() defined in the documentation for the parameter 'file_var_reader' of that function.

This function uses the function NcDataReader() in the package 'startR', which in turn uses NcToArray() in the package 'easyNCDF', which in turn uses nc_var_get() in the package 'ncdf4'.

Usage

NcVarReader(
  file_path = NULL,
  file_object = NULL,
  file_selectors = NULL,
  var_name = NULL,
  synonims
)

Arguments

file_path	A character string indicating the path to the data file to read the variable from. See details in the documentation of the parameter 'file_var_reader' of the function Start(). The default value is NULL.
file_object	An open connection to a NetCDF file, optionally with additional header information. See details in the documentation of the parameter 'file_var_reader' of the function Start(). The default value is NULL.
file_selectors	A named list containing the information of the path of the file to read data from. It is automatically provided by Start(). See details in the documentation of the parameter 'file_var_reader' of the function Start(). The default value is NULL.
var_name	A character string with the name of the variable to be read. The default value is NULL.
synonims	A named list indicating the synonims for the dimension names to look for in the requested file, exactly as provided in the parameter 'synonims' in a Start() call. See details in the documentation of the parameter 'file_var_reader' of the function Start().

Value

A multidimensional data array with the named dimensions, potentially with the attribute 'variables' with additional auxiliary data. See details in the documentation of the parameter 'file_var_reader' of the function Start().

See Also

NcOpener NcDataReader NcCloser NcDimReader

Examples

 data_path <- system.file('extdata', package = 'startR')
 file_to_open <- file.path(data_path, 'obs/monthly_mean/tos/tos_200011.nc')
 file_selectors <- c(dat = 'dat1', var = 'tos', sdate = '200011')
 synonims <- list(dat = 'dat', var = 'var', sdate = 'sdate', time = 'time',
                  latitude = 'latitude', longitude = 'longitude')
 var <- NcVarReader(file_to_open, NULL, file_selectors,
                     'tos', synonims)

startR documentation built on Sept. 12, 2023, 5:07 p.m.