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README.md
In statgenIBD: Calculation of IBD Probabilities
statgenIBD 
statgenIBD is an R package for calculating Identity By Descent (IBD)
probabilities for biparental, three and four-way crosses. Calculations
are based on Hidden Markov Models (HMM) and inheritance vectors. The HMM
calculations are implemented in Rcpp/C++.
For more complicated pedigrees
RABBIT can be used to calculate
the IBDs.
Installation
- Install from CRAN:
install.packages("statgenIBD")
- Install latest development version from GitHub (requires
remotes package):
remotes::install_github("Biometris/statgenIBD", ref = "develop", dependencies = TRUE)
Try the statgenIBD package in your browser
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statgenIBD documentation built on April 4, 2025, 1:06 a.m.
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statgenIBD
statgenIBD is an R package for calculating Identity By Descent (IBD)
probabilities for biparental, three and four-way crosses. Calculations
are based on Hidden Markov Models (HMM) and inheritance vectors. The HMM
calculations are implemented in Rcpp/C++.
For more complicated pedigrees RABBIT can be used to calculate the IBDs.
Installation
- Install from CRAN:
install.packages("statgenIBD")
- Install latest development version from GitHub (requires remotes package):
remotes::install_github("Biometris/statgenIBD", ref = "develop", dependencies = TRUE)
Try the statgenIBD package in your browser
Any scripts or data that you put into this service are public.
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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