README.md

strawr

Straw is a fast implementation of reading/dump for .hic files

Installation

remotes::install_github("aidenlab/straw/R")

Usage

# <NONE/VC/VC_SQRT/KR> <hicFile(s)> <chr1>[:x1:x2] <chr2>[:y1:y2] <BP/FRAG> <binsize>
hic.data.frame <- strawr::straw("KR", "/path/to/file.hic", "11", "11", "BP", 10000)


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strawr documentation built on Sept. 13, 2021, 5:07 p.m.