survAccuracyMeasures: Estimate accuracy measures for risk prediction markers from survival data

This package provides a function to estimate the AUC, TPR(c), FPR(c), PPV(c), and NPV(c) for for a specific timepoint and marker cutoff value c using non-parametric and semi-parametric estimators. Standard errors and confidence intervals are also computed. Either analytic or bootstrap standard errors can be computed.

AuthorYingye Zheng, Tianxi Cai, and Marshall Brown
Date of publication2014-08-23 00:46:22
MaintainerMarshall Brown <mdbrown@fhcrc.org>
LicenseGPL-2
Version1.2
https://github.com/mdbrown/survRpackages

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Files in this package

survAccuracyMeasures
survAccuracyMeasures/inst
survAccuracyMeasures/inst/README.Rmd
survAccuracyMeasures/inst/example
survAccuracyMeasures/inst/example/dipw_example.R
survAccuracyMeasures/src
survAccuracyMeasures/src/Makevars
survAccuracyMeasures/src/getWexp.cpp
survAccuracyMeasures/src/getWexp_cutoff.cpp
survAccuracyMeasures/src/Code.h
survAccuracyMeasures/src/Makevars.win
survAccuracyMeasures/src/RcppExports.cpp
survAccuracyMeasures/src/Code.cpp
survAccuracyMeasures/NAMESPACE
survAccuracyMeasures/NEWS
survAccuracyMeasures/data
survAccuracyMeasures/data/SimData.rda
survAccuracyMeasures/R
survAccuracyMeasures/R/prepareData.R survAccuracyMeasures/R/survAM.estimate.R survAccuracyMeasures/R/getEstimatesSP.R survAccuracyMeasures/R/getEstimatesNP.R survAccuracyMeasures/R/RcppExports.R survAccuracyMeasures/R/print.SurvAM.R survAccuracyMeasures/R/analytic_SE.R survAccuracyMeasures/R/subroutines.R
survAccuracyMeasures/README.md
survAccuracyMeasures/MD5
survAccuracyMeasures/DESCRIPTION
survAccuracyMeasures/man
survAccuracyMeasures/man/SimData.Rd survAccuracyMeasures/man/print.SurvAM.Rd survAccuracyMeasures/man/survAM.estimate.Rd

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