survAccuracyMeasures: Estimate accuracy measures for risk prediction markers from survival data

This package provides a function to estimate the AUC, TPR(c), FPR(c), PPV(c), and NPV(c) for for a specific timepoint and marker cutoff value c using non-parametric and semi-parametric estimators. Standard errors and confidence intervals are also computed. Either analytic or bootstrap standard errors can be computed.

Author
Yingye Zheng, Tianxi Cai, and Marshall Brown
Date of publication
2014-08-23 00:46:22
Maintainer
Marshall Brown <mdbrown@fhcrc.org>
License
GPL-2
Version
1.2
URLs

View on CRAN

Man pages

print.SurvAM
Print an object of class SurvAM-output from survEstMeasures
SimData
Simulated data for package 'SurvAccuracyMeasures'
survAM.estimate
Nonparametric and Semiparametric estimates of accuracy...

Files in this package

survAccuracyMeasures
survAccuracyMeasures/inst
survAccuracyMeasures/inst/README.Rmd
survAccuracyMeasures/inst/example
survAccuracyMeasures/inst/example/dipw_example.R
survAccuracyMeasures/src
survAccuracyMeasures/src/Makevars
survAccuracyMeasures/src/getWexp.cpp
survAccuracyMeasures/src/getWexp_cutoff.cpp
survAccuracyMeasures/src/Code.h
survAccuracyMeasures/src/Makevars.win
survAccuracyMeasures/src/RcppExports.cpp
survAccuracyMeasures/src/Code.cpp
survAccuracyMeasures/NAMESPACE
survAccuracyMeasures/NEWS
survAccuracyMeasures/data
survAccuracyMeasures/data/SimData.rda
survAccuracyMeasures/R
survAccuracyMeasures/R/prepareData.R
survAccuracyMeasures/R/survAM.estimate.R
survAccuracyMeasures/R/getEstimatesSP.R
survAccuracyMeasures/R/getEstimatesNP.R
survAccuracyMeasures/R/RcppExports.R
survAccuracyMeasures/R/print.SurvAM.R
survAccuracyMeasures/R/analytic_SE.R
survAccuracyMeasures/R/subroutines.R
survAccuracyMeasures/README.md
survAccuracyMeasures/MD5
survAccuracyMeasures/DESCRIPTION
survAccuracyMeasures/man
survAccuracyMeasures/man/SimData.Rd
survAccuracyMeasures/man/print.SurvAM.Rd
survAccuracyMeasures/man/survAM.estimate.Rd