sybilSBML: SBML Integration in Package 'Sybil'

'SBML' (Systems Biology Markup Language) with FBC (Flux Balance Constraints) integration in 'sybil'. Many constraint based metabolic models are published in 'SBML' format ('*.xml'). Herewith is the ability to read, write, and check 'SBML' files in 'sybil' provided.

AuthorC. Jonathan Fritzemeier [cre, ctb], Gabriel Gelius-Dietrich [aut, ctb], Deya Alzoubi [ctb], Ardalan Habil [ctb]
Date of publication2017-01-12 15:55:31
MaintainerC. Jonathan Fritzemeier <clausjonathan.fritzemeier@uni-duesseldorf.de>
LicenseGPL-3 | file LICENSE
Version3.0.1

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Files in this package

sybilSBML
sybilSBML/inst
sybilSBML/inst/CITATION
sybilSBML/inst/NEWS.Rd
sybilSBML/inst/INSTALL
sybilSBML/inst/README
sybilSBML/inst/extdata
sybilSBML/inst/extdata/ecoli_core_model.xml
sybilSBML/inst/doc
sybilSBML/inst/doc/sybilSBML.pdf
sybilSBML/inst/doc/sybilSBML.R
sybilSBML/inst/doc/sybilSBML.Rnw
sybilSBML/configure.ac
sybilSBML/src
sybilSBML/src/sybilSBML.c
sybilSBML/src/sybilSBML.h
sybilSBML/src/Makevars.in
sybilSBML/src/sbml.h
sybilSBML/src/sbml.c
sybilSBML/src/Makevars.win
sybilSBML/src/init.c
sybilSBML/NAMESPACE
sybilSBML/R
sybilSBML/R/readSBMLmod.R sybilSBML/R/generics.R sybilSBML/R/uglyHack.R sybilSBML/R/sybilSBML.R sybilSBML/R/sbmlPtrClass.R sybilSBML/R/zzz.R sybilSBML/R/sbmlErrorClass.R
sybilSBML/vignettes
sybilSBML/vignettes/sybilSBML.bib
sybilSBML/vignettes/sybilSBML.Rnw
sybilSBML/README.md
sybilSBML/MD5
sybilSBML/build
sybilSBML/build/vignette.rds
sybilSBML/DESCRIPTION
sybilSBML/configure
sybilSBML/man
sybilSBML/man/getSBMLmodNotes.Rd sybilSBML/man/getSBMLnumReactions.Rd sybilSBML/man/validateSBMLdocument.Rd sybilSBML/man/getSBMLmodId.Rd sybilSBML/man/getSBMLmodAnnotation.Rd sybilSBML/man/readSBMLmod.Rd sybilSBML/man/getSBMLCompartList.Rd sybilSBML/man/getSBMLnumSpecies.Rd sybilSBML/man/versionLibSBML.Rd sybilSBML/man/getSBMLFbcversion.Rd sybilSBML/man/sbmlPtr-class.Rd sybilSBML/man/sbmlError-class.Rd sybilSBML/man/getSBMLunitDefinitionsList.Rd sybilSBML/man/writeSBML.Rd sybilSBML/man/getSBMLmodel.Rd sybilSBML/man/getSBMLSpeciesList.Rd sybilSBML/man/getSBMLReactionsList.Rd sybilSBML/man/delSBMLmodel.Rd sybilSBML/man/getSBMLlevel.Rd sybilSBML/man/getSBMLmodName.Rd sybilSBML/man/openSBMLfile.Rd sybilSBML/man/getSBMLnumCompart.Rd sybilSBML/man/getSBMLerrors.Rd sybilSBML/man/getSBMLversion.Rd sybilSBML/man/closeSBMLfile.Rd
sybilSBML/configure.win
sybilSBML/cleanup
sybilSBML/LICENSE

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