tdthap: TDT tests for extended haplotypes

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Transmission/disequilibrium tests for extended marker haplotypes

Author
David Clayton
Date of publication
2013-12-10 13:12:47
Maintainer
Jing Hua Zhao <jinghua.zhao@mrc-epid.cam.ac.uk>
License
Artistic-2.0
Version
1.1-7

View on CRAN

Man pages

get.similarity
Interogate similarity function for Geary-Moran TDT tests
hap.transmit
Build parental haplotypes in nuclear families
set.similarity
Set similarity function for Geary-Moran type TDT tests
tdt.quad
TDT tests for extended haplotypes
tdt.rr
Calculate haplotype relative risks in TDT studies
tdt.select
Select informative transmissions of sub-haplotypes for the...

Files in this package

tdthap
tdthap/inst
tdthap/inst/tests
tdthap/inst/tests/test.R
tdthap/inst/tests/test.ped
tdthap/inst/doc
tdthap/inst/doc/tdthap-paper.pdf
tdthap/inst/doc/tdthap-paper.Rnw
tdthap/inst/doc/tdthap-paper.R
tdthap/src
tdthap/src/similar.c
tdthap/src/tdt.c
tdthap/src/nuc_fam.h
tdthap/src/nuc_fam.c
tdthap/NAMESPACE
tdthap/R
tdthap/R/tdthap.R
tdthap/R/zzz.R
tdthap/vignettes
tdthap/vignettes/README
tdthap/vignettes/clayton99.pdf
tdthap/vignettes/tdthap-paper.Rnw
tdthap/MD5
tdthap/DESCRIPTION
tdthap/ChangeLog
tdthap/man
tdthap/man/tdt.select.Rd
tdthap/man/set.similarity.Rd
tdthap/man/tdt.quad.Rd
tdthap/man/tdt.rr.Rd
tdthap/man/get.similarity.Rd
tdthap/man/hap.transmit.Rd
tdthap/.Rinstignore
tdthap/INDEX