separate_tags: Separate locus tag into multiple rows
In tidypmc: Parse Full Text XML Documents from PubMed Central
Description
Usage
Arguments
Value
Author(s)
Examples
View source: R/separate_tags.R
Description
Separates locus tags mentioned in full text and expands ranges like
YPO1970-74 into new rows
Usage
1
separate_tags(txt, pattern, column = "text")
Arguments
txt
a table
pattern
regular expression to match locus tags like YPO[0-9-]+ or
the locus tag prefix like YPO.
column
column name to search, default "text"
Value
a tibble with locus tag, matching text and rows.
Author(s)
Chris Stubben
Examples
1
2
x <- data.frame(row = 1, text = "some genes like YPO1002 and YPO1970-74")
separate_tags(x, "YPO")
tidypmc documentation built on Aug. 1, 2019, 5:05 p.m.
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
Description Usage Arguments Value Author(s) Examples
View source: R/separate_tags.R
Description
Separates locus tags mentioned in full text and expands ranges like YPO1970-74 into new rows
Usage
1 | separate_tags(txt, pattern, column = "text")
|
Arguments
txt |
a table |
pattern |
regular expression to match locus tags like YPO[0-9-]+ or the locus tag prefix like YPO. |
column |
column name to search, default "text" |
Value
a tibble with locus tag, matching text and rows.
Author(s)
Chris Stubben
Examples
1 2 | x <- data.frame(row = 1, text = "some genes like YPO1002 and YPO1970-74")
separate_tags(x, "YPO")
|
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
Embedding an R snippet on your website
Add the following code to your website.
For more information on customizing the embed code, read Embedding Snippets.