Man pages for tidyseurat
Brings Seurat to the Tidyverse

add_classAdd class to abject
aggregate_cellsAggregate cells
arrangeOrder rows using column values
as_tibbleCoerce lists, matrices, and more to data frames
bind_rowsEfficiently bind multiple data frames by row and column
cell_type_dfCell types of 80 PBMC single cells
countCount the observations in each group
distinctKeep distinct/unique rows
drop_classRemove class to abject
extractExtract a character column into multiple columns using...
filterKeep rows that match a condition
formattingPrinting tibbles
full_joinMutating joins
get_abundance_sc_longget abundance long
get_abundance_sc_wideget abundance wide
ggplotCreate a new 'ggplot' from a 'tidyseurat'
glimpseGet a glimpse of your data
group_byGroup by one or more variables
group_splitSplit data frame by groups
inner_joinMutating joins
join_featuresjoin_features
join_transcripts(DEPRECATED) Extract and join information for transcripts.
left_joinMutating joins
mutateCreate, modify, and delete columns
nestNest rows into a list-column of data frames
pbmc_small_nested_interactionsIntercellular ligand-receptor interactions for 38 ligands...
pipePipe operator
pivot_longerPivot data from wide to long
plotlyInitiate a plotly visualization
pullExtract a single column
quo_namesConvert array of quosure (e.g. c(col_a, col_b)) into...
renameRename columns
return_arguments_ofreturns variables from an expression
right_joinMutating joins
rowwiseGroup input by rows
sample_nSample n rows from a table
selectKeep or drop columns using their names and types
separateSeparate a character column into multiple columns with a...
sliceSubset rows using their positions
summariseSummarise each group down to one row
tbl_format_headerFormat the header of a tibble
tidytidy for 'Seurat'
uniteUnite multiple columns into one by pasting strings together
unnestUnnest a list-column of data frames into rows and columns
tidyseurat documentation built on May 29, 2024, 4:21 a.m.