Man pages for tinyVAST
Multivariate Spatio-Temporal Models using Structural Equations
| add_predictions | Add predictions to data-list |
| bering_sea | Survey domain for the eastern and northern Bering Sea surveys |
| bering_sea_pollock_ages | Survey catch-rates at age for Alaska pollock in the Eastern... |
| bering_sea_pollock_vast | Estimated proportion-at-age for Alaska pollock using VAST |
| cAIC | Calculate conditional AIC |
| classify_variables | Classify variables path |
| condition_and_density | Condition and density example |
| deviance_explained | Calculate deviance explained |
| families | Additional families |
| integrate_output | Integration for target variable |
| logLik.tinyVAST | Extract the (marginal) log-likelihood of a tinyVAST model |
| make_dsem_ram | Make a RAM (Reticular Action Model) |
| make_eof_ram | Make a RAM (Reticular Action Model) |
| make_sem_ram | Make a RAM (Reticular Action Model) from a SEM (structural... |
| parse_path | Parse path |
| predict.tinyVAST | Predict using vector autoregressive spatio-temporal model |
| print.tinyVAST | print summary of tinyVAST model |
| red_snapper | Presence/absence, count, and biomass data for red snapper |
| red_snapper_shapefile | Shapefile for red snapper analysis |
| reexports | Objects exported from other packages |
| reload_model | Reload a previously fitted model |
| residuals.tinyVAST | Calculate deviance or response residuals for tinyVAST |
| rmvnorm_prec | Multivariate Normal Random Deviates using Sparse Precision |
| rotate_pca | Rotate factors to match Principal-Components Analysis |
| salmon_returns | North Pacific salmon returns |
| sample_variable | Sample from predictive distribution of a variable |
| sea_ice | Arctic September sea ice concentrations |
| sfnetwork_evaluator | Construct projection matrix for stream network |
| sfnetwork_mesh | Make mesh for stream network |
| simulate_sfnetwork | Simulate GMRF for stream network |
| simulate.tinyVAST | Simulate new data from a fitted model |
| summary.tinyVAST | summarize tinyVAST |
| tinyVAST | Fit vector autoregressive spatio-temporal model |
| tinyVASTcontrol | Control parameters for tinyVAST |
| vcov.tinyVAST | Extract Variance-Covariance Matrix |
