Man pages for toxEval
Exploring Biological Relevance of Environmental Chemistry Observations
| clean_endPoint_info | clean_endPoint_info |
| createLink | createLink |
| create_toxEval | Load and check toxEval data |
| endpoint_hits_DT | Rank endpoints by category |
| end_point_info | Endpoint information from ToxCast |
| explore_endpoints | Explore data in the Shiny Application |
| filter_groups | Filter endPoints based on groups and assays. |
| get_ACC | Get the ACC values for a selection of chemicals |
| get_chemical_summary | Compute EAR values |
| get_concentration_summary | Create concentration summary |
| graph_data_prep | Prepare boxplot data |
| helperToxEval | toxEval helper functions |
| hits_by_groupings_DT | Biological hits per category |
| hits_summary_DT | Summary of hits per site/category |
| make_tox_map | Create an interactive map of the data |
| plot_tox_boxplots | Grouped Boxplots |
| plot_tox_endpoints | EndPoint boxplots |
| plot_tox_endpoints2 | EndPoint boxplots with faceting option |
| plot_tox_heatmap | Plot EAR heat maps |
| plot_tox_stacks | Plot stacked bar charts |
| rank_sites_DT | Rank sites by EAR |
| remove_flags | Remove endpoints with specific data quality flags from data |
| summary.toxEval | Summary of tox_list |
| ToxCast_ACC | ACC values included with toxEval. |
| tox_chemicals | ToxCast Chemical Information |
| toxEval-package | Analyze ToxCast data in relation to measured concentrations. |
