alignPoly: Align various types of coefficient matrices

In treenomial: Comparison of Trees using a Tree Defining Polynomial

Align various types of coefficient matrices

Description

Align various types of coefficient matrices

Usage

alignPoly(coefficientMatrices)

Arguments

coefficientMatrices

a list of coefficient matrices of various sizes

Details

Alignment depends on the type of coefficient matrix:

“real”

the smaller matrices columns are prepended with zero columns to align with the max number of columns and the rows are appended with zero rows to match the max number of rows

“yEvaluated”

the smaller vectors are appended with zeroes to match the max length vector

“tipLabel”

the smaller matrices are appended with zeroes to match the max number of rows and columns

Value

the aligned list of coefficient matrices

Examples

library(treenomial)
library(ape)
differentSizeTrees <- c(rtree(2), rmtree(10,10))
coeffs <- treeToPoly(differentSizeTrees, numThreads = 0)
alignedCoeffs <- alignPoly(coeffs)

treenomial documentation built on June 7, 2022, 1:08 a.m.