treeperm: Exact and Asymptotic K Sample Permutation Test
Version 1.6

An implementation of permutation tests in R, supporting both exact and asymptotic K sample test of data locations. The p value of exact tests is found using tree algorithms. Tree algorithms treat permutations of input data as tree nodes and perform constraint depth-first searches for permutations that fall into the critical region of a test systematically. Pruning of tree search and optimisations at C level enable exact tests for certain large data sets.

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AuthorQiao Kang <qk@st-andrews.ac.uk>
Date of publication2015-04-22 22:49:55
MaintainerQiao Kang <qk@st-andrews.ac.uk>
LicenseGPL-2
Version1.6
Package repositoryView on CRAN
InstallationInstall the latest version of this package by entering the following in R:
install.packages("treeperm")

Man pages

KPermutation: K Sample Exact Permutation Test
Permutation: Two Sample Exact Permutation Test
plot.treeperm: Plot Permutations
treeperm: Permutation Tests Using Tree Algorithms
treeperm-package: Exact and Asymptotic K Sample Permutation Test

Functions

FStatistics Source code
GetDistribution Source code
KPermutation Man page Source code
Ktreeperm Source code
Permutation Man page Source code
ReducedStatistics Source code
plot.treeperm Man page Source code
print.KPermutation Man page Source code
print.Permutation Man page Source code
print.summary.treeperm Man page Source code
print.treeperm Man page Source code
summary.treeperm Man page Source code
treeperm Man page Source code
treeperm-package Man page
treeperm.default Man page Source code
treeperm.formula Man page Source code

Files

src
src/Rheaders.h
src/Permutation.h
src/KPermutation.c
src/Permutation.c
src/PermFunctions.c
NAMESPACE
R
R/treeperm.R
MD5
DESCRIPTION
man
man/treeperm-package.Rd
man/KPermutation.Rd
man/treeperm.Rd
man/plot.treeperm.Rd
man/Permutation.Rd
treeperm documentation built on May 19, 2017, 11:46 p.m.