DR: Calculate the tip diversification rates (DR) for a...

In treesliceR: To Slice Phylogenetic Trees and Infer Evolutionary Patterns Over Time

Calculate the tip diversification rates (DR) for a phylogenetic tree

Description

This function computes the tip diversification rates Jetz et al., 2012, or DR, for an inputted ultrametric phylogenetic tree.

Usage

DR(tree)

Arguments

tree	phylo. An ultrametric phylogenetic tree in the "phylo" format.

Value

The function returns a data frame containing the tip diversification rates for all species within the inputted phylogenetic tree.

Author(s)

Matheus Lima de Araujo [e-mail]

References

See the tutorial on how to use this function on our website. Jetz, Walter, et al. "The global diversity of birds in space and time." Nature 491.7424 (2012): 444-448. doi:10.1038/nature11631

Examples

# Generate a random tree
tree <- ape::rcoal(20)

# Computing the tip-DR
DR(tree)

treesliceR documentation built on Sept. 11, 2024, 8:47 p.m.