join_features: join_features

In ttservice: A Service for Tidy Transcriptomics Software Suite

join_features

Description

join_features() extracts and joins information for specific features

Usage

join_features(
  .data,
  features = NULL,
  all = FALSE,
  exclude_zeros = FALSE,
  shape = "long",
  ...
)

Arguments

.data	A tidy SingleCellExperiment object
features	A vector of feature identifiers to join
all	If TRUE return all
exclude_zeros	If TRUE exclude zero values
shape	Format of the returned table "long" or "wide"
...	Parameters to pass to join wide, i.e. assay name to extract feature abundance from and gene prefix, for shape="wide"

Details

This function extracts information for specified features and returns the information in either long or wide format.

Value

A 'tbl' containing the information.for the specified features

Examples

print("this is a method generics Example is not applicable")
# <object> |> join_features(features=c("HLA-DRA", "LYZ"))

ttservice documentation built on Nov. 2, 2023, 6:06 p.m.