API for tulpa
Templated Unified Library for Posterior Approximation in Bayesian Hierarchical Models

Global functions
.accessor_unavailable Source code
.adj_check_ids Source code
.adj_component_labels Source code
.adj_from_edges Source code
.adj_resolve_ids Source code
.aghq_analytic_optim_fns Source code
.aghq_failed_group_phrase Source code
.aghq_grad_cache Source code
.aghq_group_status Source code
.aghq_is_fail Source code
.aghq_re_par_layout Source code
.aghq_sigma_penalty Source code
.all_finite_rows Source code
.append_phi_columns Source code
.ar1_rho_beta_ab Source code
.ar2_pacf_to_phi Source code
.ar2_precision Source code
.areal_field_design Source code
.areal_gibbs_type Source code
.arg_repr Source code
.arp_autocov Source code
.arp_pacf_to_phi Source code
.arp_precision Source code
.as_draws_convert Source code
.as_re_terms_list Source code
.assert_complete_groups Source code
.assert_finite_model_inputs Source code
.attach_beta_se Source code
.attach_rsr_projection Source code
.auto_backend_ok Source code
.auto_drop_unread_threads Source code
.backend_carries_weights Source code
.bar_field_check_mode Source code
.bar_field_columns Source code
.bar_field_fit_core Source code
.bar_field_fit_finalize Source code
.bar_field_replicate Source code
.bar_field_term_labels Source code
.bary_eval Source code
.bary_interp_rat Source code
.bary_poles Source code
.bary_secular_roots Source code
.bary_zeros Source code
.beta_dscore_dphi Source code
.beta_prior_applied Source code
.beta_prior_fields Source code
.beta_prior_ridge_sd Source code
.brasil Source code
.build_warm_start Source code
.bundle_to_re_list Source code
.bym2_component_scaling Source code
.canonical_family Source code
.car_proper_precision_Q Source code
.car_proper_sampler_spec Source code
.categorical_design Source code
.categorical_levels Source code
.categorical_link_design Source code
.categorical_loglik Source code
.categorical_model_frame Source code
.categorical_probs Source code
.ccd_axial_derivs Source code
.ccd_axial_rows Source code
.ccd_budget Source code
.ccd_corner_rows Source code
.ccd_design_nodes Source code
.ccd_first_evals Source code
.ccd_format_secs Source code
.ccd_meter_beat Source code
.ccd_meter_new Source code
.ccd_meter_round Source code
.ccd_meter_spend Source code
.ccd_min_evals Source code
.ccd_now Source code
.ccd_placement Source code
.ccd_placement_args Source code
.ccd_placement_cfg Source code
.ccd_progress_opts Source code
.ccd_rescue_evals Source code
.ccd_rethrow_budget Source code
.ccd_round_evals Source code
.ccd_seed_evals Source code
.ccd_stencil_evals Source code
.cheb_nodes Source code
.check_contrast_levels Source code
.check_coords_finite Source code
.check_coords_rows Source code
.check_count Source code
.check_information_criterion Source code
.check_lkj_eta Source code
.check_matern_nu Source code
.check_n_quad Source code
.check_offsets Source code
.check_pc_anchor_pair Source code
.check_pc_anchors Source code
.check_re_prior_backend Source code
.check_run_length Source code
.check_scalar Source code
.check_sn Source code
.check_spde_prior_args Source code
.check_spde_rows Source code
.check_temporal_gp_kernel Source code
.check_time_complete Source code
.check_unit_interval Source code
.cila_config Source code
.cila_draws Source code
.cila_first_fallback Source code
.cila_first_reason Source code
.cila_logmeanexp Source code
.cila_pool Source code
.cila_record Source code
.cila_request Source code
.cila_variant_used Source code
.cjs_dist_ps Source code
.cjs_identical Source code
.clamp_none Source code
.clamp_pos Source code
.clamp_unit Source code
.coerce_var_arg Source code
.compare_fit_loglik Source code
.compose_family_ops Source code
.confint_rows Source code
.control_subset Source code
.coord_dist_to Source code
.coord_scale Source code
.coords_2col Source code
.coords_plain Source code
.cpp_joint_multi Source code
.cpp_joint_multi_batch Source code
.criteria_col_lse Source code
.criteria_col_var Source code
.criteria_matrix_or_stop Source code
.cv_heldout_lpd Source code
.cv_refit Source code
.cv_refit_setup Source code
.cv_trials Source code
.decode_response Source code
.dispersion_families Source code
.draw_z_default Source code
.draws_by_prefix Source code
.drop_aliased_fixed Source code
.drop_null Source code
.eb_closed_hessian Source code
.eb_exact_stencil Source code
.eb_fd_evaluator Source code
.eb_fd_stencil Source code
.eb_marginal_correction Source code
.eb_theta_names Source code
.ep_site_mode Source code
.ep_tilted_moments Source code
.extract_varying_coef Source code
.family_base Source code
.family_dphi Source code
.family_dphi2 Source code
.family_dphi2_needs_obs Source code
.family_object_to_name Source code
.family_obs_weight Source code
.family_ops Source code
.family_or_stop Source code
.family_reads_trials Source code
.field_design_Z Source code
.field_draws_stats Source code
.field_effects_nested Source code
.field_effects_read Source code
.field_effects_sampler Source code
.field_effects_spde Source code
.field_effects_unavailable Source code
.field_point_stats Source code
.field_read Source code
.field_type Source code
.field_unit_labels Source code
.fill_absent_response Source code
.finalize_fit Source code
.fit_block_via_laplace Source code
.fit_block_via_nested_laplace Source code
.fit_draws Source code
.fit_em_block Source code
.fit_estimated_hyperparameters Source code
.fit_fixed_table Source code
.fit_header Source code
.fit_hyper_table Source code
.fit_one_draw Source code
.fit_reliability Source code
.fits_to_param_vec Source code
.fixed_coef_draws Source code
.fixed_draw_cols Source code
.fixed_draws_mat Source code
.format_duration Source code
.gauss_hermite Source code
.gibbs_correction Source code
.gibbs_field_eta_contrib Source code
.gibbs_field_unit_draws Source code
.glmm_mala_metric Source code
.glmm_mode_precision Source code
.glmm_weight_needs_y Source code
.gp_field_at Source code
.gp_gibbs_nn_inputs Source code
.gp_gibbs_require_one_obs_per_loc Source code
.gp_phi_bounds Source code
.gp_phi_from_logit Source code
.gp_sampler_spec Source code
.graph_components Source code
.graph_n_components Source code
.grid_mixture_moments Source code
.group_sum Source code
.has_draws Source code
.hp_axis_default Source code
.hp_axis_prior Source code
.hp_block_extent Source code
.hp_choice Source code
.hp_col_prefix Source code
.hp_col_prefix_vec Source code
.hp_collect Source code
.hp_coord_fields Source code
.hp_declare Source code
.hp_declare_on_columns Source code
.hp_decline Source code
.hp_integrated_axes Source code
.hp_is_logchol_col Source code
.hp_is_tensor Source code
.hp_log_scale_density Source code
.hp_logchol_block_cols Source code
.hp_logchol_coords Source code
.hp_logchol_design Source code
.hp_logchol_designs Source code
.hp_logchol_key Source code
.hp_logchol_key_pre Source code
.hp_logchol_log_density Source code
.hp_prefix Source code
.hp_range_anchor Source code
.hsgp_field_at Source code
.hsgp_sampler_spec Source code
.hyper_adaptive_refine_pass Source code
.hyper_add_logchol_measure Source code
.hyper_apply_axis_refinement Source code
.hyper_at_mode_reach Source code
.hyper_atom_fold_scale Source code
.hyper_axis_atom_mass Source code
.hyper_axis_bare Source code
.hyper_axis_bounds Source code
.hyper_axis_coord Source code
.hyper_axis_coord_bounds Source code
.hyper_axis_domain Source code
.hyper_axis_edge_scores Source code
.hyper_axis_is_log_scale Source code
.hyper_axis_level_weights Source code
.hyper_axis_may_extend Source code
.hyper_axis_measure Source code
.hyper_axis_node_limit Source code
.hyper_axis_refinement_order Source code
.hyper_axis_scale Source code
.hyper_axis_specs_normalise Source code
.hyper_axis_support Source code
.hyper_cell_widths Source code
.hyper_check_copy_slab Source code
.hyper_clip_to_node_limit Source code
.hyper_consistency_pass Source code
.hyper_copy_slab_density Source code
.hyper_default_coord_bounds Source code
.hyper_detect_axis_refinement Source code
.hyper_domain_clamp Source code
.hyper_empty_msg Source code
.hyper_gap_misread Source code
.hyper_gap_read Source code
.hyper_grid_make_hp_fn Source code
.hyper_grid_make_kernel_fn Source code
.hyper_grid_supports Source code
.hyper_is_atom_level Source code
.hyper_level_frontier Source code
.hyper_log_quad_weights Source code
.hyper_logchol_group_cols Source code
.hyper_logchol_groups Source code
.hyper_logchol_log_measure Source code
.hyper_mode_points Source code
.hyper_new_cells_only Source code
.hyper_prior_carry Source code
.hyper_propose_at_mode Source code
.hyper_propose_axis_extension Source code
.hyper_propose_edge_close Source code
.hyper_propose_interior_densification Source code
.hyper_propose_mass_bisection Source code
.hyper_refinable_axes Source code
.hyper_refinable_names Source code
.hyper_refine_screen Source code
.hyper_row_key Source code
.hyper_row_warm_starts Source code
.hyper_slice_home Source code
.hyper_span_coord_bounds Source code
.hyper_spec_bounds Source code
.hyper_spec_by_name Source code
.hyper_tensor_level_cells Source code
.hyperparam_summary Source code
.hyperprior_backends Source code
.icar_precision_Q Source code
.infer_step Source code
.inner_k_attach Source code
.inner_k_decline Source code
.inner_k_decline_from_skew Source code
.inner_k_decline_note Source code
.inner_k_from_curve Source code
.inner_skew_attach Source code
.inner_skew_attach_probe Source code
.inner_skew_decline Source code
.inner_skew_decline_note Source code
.inner_skew_is_structural Source code
.interval_colnames Source code
.is_bar_call Source code Source code
.is_copy_spec_list Source code
.is_multi_block_prior Source code
.is_scalar_num Source code
.is_scalar_re_intercept Source code
.is_spatial_field_call Source code
.is_temporal_field_call Source code
.is_usable_cov Source code
.isolated_node_field Source code
.isolated_node_text Source code
.joint_adaptive_engage Source code
.joint_adaptive_flood Source code
.joint_adaptive_grid Source code
.joint_adaptive_neighbors Source code
.joint_adaptive_seed_axis Source code
.joint_alpha_declared Source code
.joint_alpha_slots Source code
.joint_alpha_write Source code
.joint_announce_integration Source code
.joint_attach_by_arm_k Source code
.joint_attach_diagnose_cost Source code
.joint_attach_grid_fixed Source code
.joint_attach_k_quality Source code
.joint_attach_observations Source code
.joint_attach_pareto_k_multi Source code
.joint_attach_pareto_k_regime Source code
.joint_attach_pareto_k_single Source code
.joint_attach_pareto_k_uncertainty Source code
.joint_attach_placement Source code
.joint_axis_continuum_levels Source code
.joint_axis_domains Source code
.joint_axis_geometry Source code
.joint_axis_is_dispersion Source code
.joint_axis_is_stated Source code
.joint_axis_refine_eligible Source code
.joint_axis_refine_mode Source code
.joint_axis_refine_modes Source code
.joint_axis_refine_modes_by Source code
.joint_axis_span Source code
.joint_axis_specs Source code
.joint_axis_specs_from_grid Source code
.joint_axis_tags_raw Source code
.joint_block_arms Source code
.joint_block_axis_cols Source code
.joint_block_axis_grid Source code
.joint_block_scale_slots Source code
.joint_block_spec_for_cpp Source code
.joint_call_kernel_via_multi Source code
.joint_cand_spec Source code
.joint_cartesian Source code
.joint_ccd_atom_axes Source code
.joint_ccd_axis_tags Source code
.joint_ccd_calibrate_step Source code
.joint_ccd_component Source code
.joint_ccd_coord_tags Source code
.joint_ccd_engage Source code
.joint_ccd_eval_mode Source code
.joint_ccd_fd_stencil Source code
.joint_ccd_grid Source code
.joint_ccd_grid_seed Source code
.joint_ccd_modefind Source code
.joint_ccd_neg_def Source code
.joint_ccd_outer_hess_ok Source code
.joint_ccd_pilot_seed Source code
.joint_cell_convergence Source code
.joint_check_axis_refine Source code
.joint_check_multi_hyperpriors Source code
.joint_compute_tile_partition Source code
.joint_constraint_cols Source code
.joint_copy_arm_index Source code
.joint_copy_spec_for_block Source code
.joint_copy_specs Source code
.joint_declared_axis_ref Source code
.joint_dispatch_multi Source code
.joint_draw_cell Source code
.joint_extras_first_with Source code
.joint_extras_from_res Source code
.joint_finalize_grid_fixed Source code
.joint_fixed_layout Source code
.joint_glue_extras_to_res Source code
.joint_grid_batch_ineligible Source code
.joint_grid_batch_intercept Source code
.joint_grid_batch_restore_seed Source code
.joint_grid_batch_run Source code
.joint_grid_batch_seed Source code
.joint_grid_request_canonical Source code
.joint_grid_request_check Source code
.joint_grid_request_design Source code
.joint_grids_from_cells Source code
.joint_has_grid_modes Source code
.joint_hp_field Source code
.joint_hp_fn_for_block Source code
.joint_hp_named_blocks Source code
.joint_hp_vec_for_grids Source code
.joint_hyperprior Source code
.joint_init_extras_from_res Source code
.joint_inner_vcov_block_one Source code
.joint_integration_weights Source code
.joint_is_block_hyperprior Source code
.joint_is_chain_order Source code
.joint_is_solve_reordered Source code
.joint_layout Source code
.joint_local_ccd_axis_bary Source code
.joint_local_ccd_axis_bary_numeric Source code
.joint_local_ccd_axis_box Source code
.joint_local_ccd_axis_box_numeric Source code
.joint_local_ccd_axis_declined Source code
.joint_local_ccd_barycentre Source code
.joint_local_ccd_box_mass Source code
.joint_local_ccd_cell_bary Source code
.joint_local_ccd_cell_box_mass Source code
.joint_local_ccd_cell_curv Source code
.joint_local_ccd_cell_stencil Source code
.joint_local_ccd_diff3 Source code
.joint_local_ccd_engage Source code
.joint_local_ccd_log_dnorm_diff Source code
.joint_local_ccd_log_pnorm_diff Source code
.joint_local_ccd_marginal_sd Source code
.joint_local_ccd_mass Source code
.joint_local_ccd_misfit Source code
.joint_local_ccd_mode_gain Source code
.joint_local_ccd_neighbors Source code
.joint_local_ccd_rank_score Source code
.joint_local_ccd_reason_tally Source code
.joint_local_ccd_refine Source code
.joint_local_ccd_select Source code
.joint_main_grid_solve Source code
.joint_make_diag_refit Source code
.joint_make_kernel_fn Source code
.joint_mixture_moments Source code
.joint_modal_mode Source code
.joint_modal_theta Source code
.joint_movable_extra_axes Source code
.joint_multi_add_hp Source code
.joint_multi_attach_integration Source code
.joint_multi_axis_is_stated Source code
.joint_multi_call_factory Source code
.joint_multi_cpp_grid Source code
.joint_multi_cross_phi Source code
.joint_multi_declared_axes Source code
.joint_multi_hp_cols Source code
.joint_multi_hp_families Source code
.joint_multi_hp_specs Source code
.joint_multi_hyperprior Source code
.joint_multi_layout Source code
.joint_multi_make_kernel_fn Source code
.joint_multi_measure_specs Source code
.joint_multi_phi_per_arm Source code
.joint_nearest_grid_mode Source code
.joint_pareto_arm_axes Source code
.joint_pareto_axis_tags Source code
.joint_pareto_block_tags Source code
.joint_pareto_fwd Source code
.joint_pareto_grid_mode_cov Source code
.joint_pareto_grid_regime Source code
.joint_pareto_grid_u Source code
.joint_pareto_grid_vary_axes Source code
.joint_pareto_inv Source code
.joint_pareto_k Source code
.joint_pareto_make_lt Source code
.joint_pareto_mode_cov Source code
.joint_pareto_prepare Source code
.joint_pareto_uncertainty Source code
.joint_pareto_vary_axes Source code
.joint_parse_hyperprior Source code
.joint_parse_sigma_prior Source code
.joint_phi_args_to_kernel Source code
.joint_phi_axis_is_stated Source code
.joint_phi_grid_entry Source code
.joint_phi_grid_per_arm Source code
.joint_place_axes Source code
.joint_placement_families Source code
.joint_placement_mode Source code
.joint_placement_railed Source code
.joint_placement_slots Source code
.joint_placement_wanted Source code
.joint_posterior_moments_multi Source code
.joint_prune_safety_gate Source code
.joint_refine_outer_grid Source code
.joint_resolve_unconverged Source code
.joint_rows_of Source code
.joint_spec_axis_names Source code
.joint_warm_start_per_cell Source code
.joint_with_grid_batch Source code
.joint_with_quiet_opts Source code
.k_attach_declined Source code
.k_band_b Source code
.k_cand_spec Source code
.k_decline Source code
.k_decline_is_permanent Source code
.k_decline_label Source code
.k_decline_note Source code
.k_dispatch Source code
.k_dispatch_report Source code
.k_hull_weight Source code
.k_is_decline Source code
.k_outer_tail_points Source code
.k_reason_of Source code
.k_score_gaussian Source code
.k_score_mixture Source code
.k_score_skew Source code
.k_score_symmetric Source code
.k_skew_rescue Source code
.k_tail_cap_warn Source code
.k_wtd_moments Source code
.kdiag_capture Source code
.kdiag_knobs Source code
.kfold_fixed_draws Source code
.laplace_areal_field Source code
.laplace_count_design Source code
.laplace_exact_supports_zi Source code
.laplace_joint_hessian Source code
.laplace_marginal_H_fixed Source code
.laplace_mode_settled Source code
.laplace_multi_re_model_args Source code
.laplace_multi_re_sigma_list Source code
.laplace_obs_delta Source code
.laplace_obs_delta_deta Source code
.laplace_obs_delta_dphi Source code
.laplace_observed_H_joint Source code
.laplace_phi_fields Source code
.laplace_re_conditional_draws Source code
.lattice_adjacency Source code
.layout_span_cols Source code
.linked_family_ops Source code
.lkj_log_normaliser Source code
.local_maxima_golden Source code
.log1mexp Source code
.log_1mpi Source code
.log_pi Source code
.loglik_decline Source code
.logspace_add Source code
.lr_rises_with_radius Source code
.make_joint_kernel_caller Source code
.make_prior Source code
.make_seed_restore Source code
.marginal_H_beta_bym2 Source code
.marginal_H_beta_car_proper Source code
.marginal_H_beta_field Source code
.marginal_H_beta_gp Source code
.marginal_H_beta_hsgp Source code
.marginal_H_beta_icar Source code
.marginal_H_beta_spde Source code
.max_rel_change Source code
.mcar_default_logchol_grid Source code
.mean_beta Source code
.mean_binomial Source code
.mean_identity Source code
.mean_log Source code
.mi_correction Source code
.model_criterion Source code
.msgp_sampler_spec Source code
.multi_block_per_arm_idx Source code
.multi_block_svc_weight Source code
.multinomial_class_probs Source code
.name_means_by_parameter Source code
.name_models Source code
.negate_term Source code
.nested_any_weighted_converged Source code
.nested_axis_map Source code
.nested_cell_fixed_cov Source code
.nested_converged_cells Source code
.nested_fixed_moments Source code
.nested_grid_pareto_k Source code
.nested_grid_radius_cap Source code
.nested_hyper_summary Source code
.nested_is_pareto_k Source code
.nested_outer_pareto_k Source code
.new_tulpa_adjacency Source code
.new_unsettled_state Source code
.nl_adj_args Source code
.nl_align_unresolved_sd Source code
.nl_ar_p_hyper_summary Source code
.nl_atom_compose Source code
.nl_atom_rescale Source code
.nl_atom_split Source code
.nl_attach_axis_sd Source code
.nl_attach_evidence Source code
.nl_attach_grid_hessians Source code
.nl_attach_hyper_draws Source code
.nl_attach_interval_provenance Source code
.nl_attach_outer_integration Source code
.nl_attach_outer_threads Source code
.nl_attach_pareto_k Source code
.nl_attach_railed_axes Source code
.nl_auto_fields_at Source code
.nl_axis_alias Source code
.nl_axis_atoms Source code
.nl_axis_colname Source code
.nl_axis_continuum Source code
.nl_axis_declared_levels Source code
.nl_axis_domain_entry Source code
.nl_axis_edge_mass Source code
.nl_axis_equiv_hint Source code
.nl_axis_geometry Source code
.nl_axis_h_over_sd Source code
.nl_axis_hold Source code
.nl_axis_index Source code
.nl_axis_is_pinned Source code
.nl_axis_marginal_logdensity Source code
.nl_axis_marginal_w Source code
.nl_axis_matches_default Source code
.nl_axis_measure_quad Source code
.nl_axis_names Source code
.nl_axis_placement_fires Source code
.nl_axis_quad_ess Source code
.nl_axis_quantiles Source code
.nl_axis_rail Source code
.nl_axis_railed Source code
.nl_axis_recenter_from_fit Source code
.nl_axis_recenter_from_fit_full Source code
.nl_axis_ref_nodes Source code
.nl_axis_refine Source code
.nl_axis_refusal Source code
.nl_axis_resolution Source code
.nl_axis_row_id Source code
.nl_axis_sd_choice Source code
.nl_axis_sd_declined Source code
.nl_axis_sd_reason Source code
.nl_axis_span_u Source code
.nl_axis_span_u_st Source code
.nl_bind_cell_results Source code
.nl_block_auto_fields Source code
.nl_block_axis_grid Source code
.nl_block_is_projected Source code
.nl_block_log_hyperprior Source code
.nl_block_projector Source code
.nl_block_roles Source code
.nl_block_spec_for_cpp Source code
.nl_block_strip_auto Source code
.nl_box_cdf_quantile Source code
.nl_box_edges Source code
.nl_box_edges_from Source code
.nl_box_quantile Source code
.nl_cell_edges Source code
.nl_cell_fill Source code
.nl_cell_partition Source code
.nl_cell_shape Source code
.nl_check_axis_fields Source code
.nl_check_axis_open_interval Source code
.nl_check_block_axis_fields Source code
.nl_check_block_fields Source code
.nl_check_copy_specs Source code
.nl_check_grid_cap Source code
.nl_check_one_copy_spec Source code
.nl_check_paired_axes Source code
.nl_check_prune_log_gap Source code
.nl_check_prune_tol Source code
.nl_check_screen_iters Source code
.nl_checkpoint_args Source code
.nl_chunked_kernel Source code
.nl_cila_attach Source code
.nl_copy_alpha_axis Source code
.nl_copy_spec_refusal Source code
.nl_cov_factor Source code
.nl_decline_axis Source code
.nl_decline_is_axis_scoped Source code
.nl_decline_recenter Source code
.nl_default_range_prior Source code
.nl_dense_grid_warn Source code
.nl_diag Source code
.nl_dispatch Source code
.nl_dispatch_multi Source code
.nl_domain_of_bounds Source code
.nl_draw_chol Source code
.nl_draws_check_n Source code
.nl_edge_axis_hit Source code
.nl_edge_mass_axes Source code
.nl_evidence_uncovered Source code
.nl_extend_partition Source code
.nl_family_axis_key Source code
.nl_field_axis_keys Source code
.nl_field_mixture Source code
.nl_field_mixture_draws Source code
.nl_fill_family_axes Source code
.nl_fit_n_blocks Source code
.nl_fit_outer_mode Source code
.nl_fit_reliability Source code
.nl_fixed_interval Source code
.nl_fold_hyperprior Source code
.nl_gamma1_by_fixed Source code
.nl_gauss_legendre_unit Source code
.nl_gauss_mixture_summary Source code
.nl_grid_axis Source code
.nl_grid_crossing Source code
.nl_grid_ess Source code
.nl_grid_layout Source code
.nl_grid_log_quad Source code
.nl_grid_par Source code
.nl_grid_provenance Source code
.nl_hyper_axis_cell_moments Source code
.nl_hyper_axis_draw Source code
.nl_hyper_axis_geometry Source code
.nl_hyper_axis_index Source code
.nl_hyper_copula Source code
.nl_hyperprior Source code
.nl_inner_bands_by_fixed Source code
.nl_inner_skew_at_theta Source code
.nl_internal_batch Source code
.nl_interp_repair Source code
.nl_interval_provenance Source code
.nl_known_axis_fields Source code
.nl_laplace_at_mode_sd_axis Source code
.nl_lbfgsb_mode_find Source code
.nl_level_edges Source code
.nl_level_log_width Source code
.nl_log_hyperprior_folded Source code
.nl_lq_axis_draw Source code
.nl_lq_axis_geometry Source code
.nl_lq_cdf_quantile Source code
.nl_lq_group Source code
.nl_lq_quad Source code
.nl_lq_quantile Source code
.nl_lq_reconstruct Source code
.nl_max_grid_cells Source code
.nl_mixture_cells Source code
.nl_mixture_draw Source code
.nl_modal_joint_precision Source code
.nl_mode_find Source code
.nl_mode_find_tuning Source code
.nl_moment_quantile Source code
.nl_multi_grid_warn Source code
.nl_nearest_correlation Source code
.nl_nngp_field_args Source code
.nl_node_support Source code
.nl_normalise_weights_safe Source code
.nl_out_of_scope_reason Source code
.nl_outer_log_evidence Source code
.nl_outer_mode_axes Source code
.nl_outer_request Source code
.nl_outer_threads Source code
.nl_outer_width Source code
.nl_path_axis_fields Source code
.nl_path_axis_key Source code
.nl_path_crosses Source code
.nl_phi_axis_hold Source code
.nl_phi_axis_slots Source code
.nl_phi_provenance Source code
.nl_pilot_alpha Source code
.nl_pilot_alpha_grid Source code
.nl_pilot_attach Source code
.nl_pilot_axis Source code
.nl_pilot_block Source code
.nl_pilot_control Source code
.nl_pilot_field_coef Source code
.nl_pilot_n Source code
.nl_placement_axis_wanted Source code
.nl_placement_box Source code
.nl_placement_mode Source code
.nl_posterior_moments Source code
.nl_posterior_moments_multi Source code
.nl_prior_sigma_is_pinned Source code
.nl_probe_to_fixed Source code
.nl_progress_args Source code
.nl_prune_dropped_mass Source code
.nl_prune_gate Source code
.nl_prune_merged_record Source code
.nl_prune_placement_fallback Source code
.nl_prune_placement_lost Source code
.nl_prune_tol_from_control Source code
.nl_publish_axis_dropped Source code
.nl_railed_axes Source code
.nl_read_sd Source code
.nl_recenter Source code
.nl_recenter_axis Source code
.nl_recenter_axis_full Source code
.nl_recenter_log_axis Source code
.nl_recenter_mode Source code
.nl_recenter_pilot Source code
.nl_recenter_sd_clamp Source code
.nl_record_unconverged Source code
.nl_reduce_decline Source code
.nl_reduce_failed Source code
.nl_refinable_registry_axes Source code
.nl_refine_cargs Source code
.nl_refine_registry Source code
.nl_refine_screen_offset Source code
.nl_refined_block Source code
.nl_refined_theta Source code
.nl_refuse_projector Source code
.nl_registry_axis_mode_cov Source code
.nl_registry_axis_slots Source code
.nl_registry_axis_tags Source code
.nl_registry_grid_rescue Source code
.nl_registry_refine_modes Source code
.nl_registry_write_theta Source code
.nl_rescue_axis_nodes Source code
.nl_role_cols Source code
.nl_scale_anchor Source code
.nl_screen Source code
.nl_screen_log_offset Source code
.nl_sigma_axis_railed Source code
.nl_single_block_width Source code
.nl_single_node_axes Source code
.nl_skew_by_fixed Source code
.nl_skew_correction Source code
.nl_skew_correction_attach Source code
.nl_skew_gamma1_eligible Source code
.nl_skew_gamma3_eligible Source code
.nl_skew_marginal Source code
.nl_skew_term_eligible Source code
.nl_spatial_field_layout Source code
.nl_st_axis_specs Source code
.nl_st_default Source code
.nl_strip_auto Source code
.nl_subspace_debias_attach Source code
.nl_subspace_grid_draws Source code
.nl_summary_quantile Source code
.nl_summary_quantile_read Source code
.nl_temporal_field_cols Source code
.nl_temporal_latent_block Source code
.nl_theta_matrix Source code
.nl_want_fitted_var Source code
.nl_warn_indefinite Source code
.nl_warn_single_node_axes Source code
.nl_warn_unconverged Source code
.nl_warn_unplaced_rail Source code
.nl_with_internal_batch Source code
.nl_within_cell_mode Source code
.nl_wtd_mean_sd Source code
.nl_wtd_quantile Source code
.nlj_inner_skew_at_theta Source code
.nlj_multi_inner_skew_at_theta Source code
.nngp_cov_fn Source code
.nngp_precision_Q Source code
.normal_scale_dphi Source code
.normal_scale_dphi2 Source code
.normalise_arm_cell_coupling Source code
.normalise_arm_field_coef Source code
.normalise_joint_arm Source code
.normalise_joint_arm_core Source code
.normalise_joint_arm_multi Source code
.normalise_phi_grid Source code
.normalize_beta_prior Source code
.normalize_n_trials Source code
.normalize_zi_prior Source code
.numeric_response Source code
.nuts_name_fixed_effects Source code
.onLoad Source code
.ordinal_class_probs Source code
.ordinal_link_cdf Source code
.ordinal_nll Source code
.ordinal_table_split Source code
.orthogonal_complement_projection Source code
.owens_T Source code
.parse_coord_spec Source code
.parse_family_link Source code
.pg_as_chain Source code
.pg_gibbs_common_args Source code
.phi2_backends Source code
.phi2_or_stop Source code
.phi_is_variance Source code
.phi_to_kernel Source code
.phi_to_registry Source code
.plot_smooths Source code
.poly_from_roots Source code
.predict_zi_mean_quantiles Source code
.preserve_seed_in_frame Source code
.print_draws_summary Source code
.print_effect_table Source code
.print_fit_body Source code
.print_fit_call Source code
.print_nested_laplace Source code
.print_nested_laplace_body Source code
.print_reliability Source code
.print_smooth_section Source code
.print_varying_coef Source code
.prior_from_spatial_spec Source code
.prior_from_temporal_spec Source code
.ps_component_loglik Source code
.ps_component_logprior Source code
.ps_conf_bands Source code
.ps_fixed_draws Source code
.ps_khat_threshold Source code
.ps_rmvnorm Source code
.ps_smoothed_weights Source code
.ps_wtd_quantile Source code
.psis_tail_len Source code
.quantile_colnames Source code
.ranef_empirical Source code
.ranef_overlay_sampled Source code
.range_to_data_units Source code
.re_L_to_logchol Source code
.re_block_L_derivs Source code
.re_block_d2Sigma Source code
.re_block_dSigma Source code
.re_chol_from_raw Source code
.re_chol_spd Source code
.re_coef_draws Source code
.re_col_idx Source code
.re_cov_L_list_to_theta Source code
.re_cov_block_label Source code
.re_cov_block_layout Source code
.re_cov_block_logprior Source code
.re_cov_block_variances Source code
.re_cov_build_re_list Source code
.re_cov_debias_coord_draws Source code
.re_cov_derived_matrix Source code
.re_cov_derived_matrix_multi Source code
.re_cov_derived_summary Source code
.re_cov_joint_prior Source code
.re_cov_map_summary Source code
.re_cov_method Source code
.re_cov_n_re Source code
.re_cov_nested_beta_draws Source code
.re_cov_node_checkpoint Source code
.re_cov_pack Source code
.re_cov_resolve_hyperprior Source code
.re_cov_theta_fit Source code
.re_cov_theta_to_L_list Source code
.re_design Source code
.re_design_matrix Source code
.re_draws_mat Source code
.re_gibbs_block_prior Source code
.re_gibbs_fixed_alias Source code
.re_gibbs_re_labels Source code
.re_logchol_to_L Source code
.re_names_from_layout Source code
.re_noncentered_effects Source code
.re_prior_backend_keys Source code
.re_scale_estimating_backends Source code
.report_isolated_nodes Source code
.reports_gaussian_posterior Source code
.require_fixed_effects Source code
.require_scalar_response Source code
.resolve_copy Source code
.resolve_copy_multi Source code
.resolve_force_sparse Source code
.resolve_inner_factorization Source code
.resolve_obs Source code
.resolve_one_copy_spec Source code
.resolve_pair_trials Source code
.resolve_spatial_idx Source code
.resolve_time_index Source code
.resolve_varying_coef_columns Source code
.resolve_warm_start Source code
.response_loglik Source code
.response_mean Source code
.response_sample Source code
.response_variance Source code
.rinvgauss Source code
.rinvwishart Source code
.rsr_spatial_type Source code
.rsr_unit_projection Source code
.rtrunc_count Source code
.s3_borrow_default Source code
.s3_register Source code
.safe_exp Source code
.safe_pos_eta Source code
.sampler_engine_eta Source code
.sbc_abs_moment Source code
.sbc_bounds Source code
.sbc_carries Source code
.sbc_check_fresh_groups Source code
.sbc_check_numeric Source code
.sbc_check_pooling Source code
.sbc_check_proper_prior Source code
.sbc_extent Source code
.sbc_guard_model Source code
.sbc_longest_leaf Source code
.sbc_num_leaves Source code
.sbc_panel_note Source code
.sbc_premise_proper_prior Source code
.sbc_rep_seed Source code
.sbc_report_frame Source code
.sbc_scored_kinds Source code
.sbc_verdict Source code
.sbc_weights Source code
.sbc_with_seed Source code
.scale_coords_isotropic Source code
.schur_H_beta Source code
.seed_scoped Source code
.sel_redirect Source code
.sim_fit_is_named_list Source code
.sim_fit_source Source code
.skew_se Source code
.smooth_block_from_call Source code
.sn_prop_from_moments Source code
.sn_prop_logpdf Source code
.sn_prop_rand Source code
.snapshot_seed Source code
.spatial_field_blocks Source code
.spatial_range_kernel_units Source code
.spatial_spec_to_nl_prior Source code
.spd_inverse Source code
.spde_A_at Source code
.spde_assemble_at Source code
.spde_fem_matrices Source code
.spde_hyperprior_record Source code
.spde_kappa_tau Source code
.spde_laplace_fractional_at Source code
.spde_linpred_se Source code
.spde_log_hyperprior Source code
.spde_mean_marginal_var Source code
.spde_nested_logmarginal_at Source code
.spde_nu_is_fractional Source code
.spde_pareto_k Source code
.spde_phi_variance Source code
.spde_precision_Q Source code
.spde_range_sigma Source code
.spde_rational_assemble Source code
.spde_rational_roots Source code
.spde_rational_roots_r Source code
.special_term_var Source code
.st_attach_outer_integration Source code
.st_auto_grid_rescue Source code
.st_axis_fwd Source code
.st_axis_inv Source code
.st_axis_map Source code
.st_grid_axes Source code
.st_knob_is_pinned Source code
.st_log_grid Source code
.st_log_hyperprior Source code
.st_pinned_axes Source code
.st_probe_log_marginal Source code
.st_set_grid_args Source code
.stencil_offsets Source code
.stored_draw_field_specs Source code
.strip_rhs Source code
.subspace_band_rank Source code
.subspace_bands Source code
.subspace_closure Source code
.subspace_debias_config Source code
.subspace_debias_record Source code
.subspace_debias_request Source code
.subspace_node_draws Source code
.subspace_select Source code
.summary_draws_mat Source code
.summary_varying_coef Source code
.svc_sampler_spec Source code
.synth_gaussian_draws Source code
.t_df Source code
.temporal_draws_from_fit Source code
.temporal_field_blocks Source code
.temporal_field_spec Source code
.temporal_spec_to_nl_prior Source code
.tgmrf_fit_imh Source code
.tgmrf_fit_nuts Source code
.tgmrf_fit_nuts_joint Source code
.tgmrf_fit_vi Source code
.tgmrf_make_log_marginal Source code
.tgmrf_obs_idx Source code
.tgmrf_pilot Source code
.tier_backends Source code
.timing_summary_line Source code
.tnb2_shape Source code
.tulpa_approx_diag_table Source code
.tulpa_approx_scope Source code
.tulpa_autocov Source code
.tulpa_axis_dropped Source code
.tulpa_axis_dropped_line Source code
.tulpa_axis_dropped_note Source code
.tulpa_chain_diag_table Source code
.tulpa_chain_id Source code
.tulpa_chain_list Source code
.tulpa_check_fit_convergence Source code
.tulpa_combined_reliability Source code
.tulpa_default_beta_prior Source code
.tulpa_designs Source code
.tulpa_divergence_record Source code
.tulpa_divergent_idx Source code
.tulpa_divergent_np Source code
.tulpa_draw_names Source code
.tulpa_draws_array Source code
.tulpa_draws_kind Source code
.tulpa_energy_bfmi Source code
.tulpa_ess Source code
.tulpa_ess_bulk Source code
.tulpa_ess_mean Source code
.tulpa_ess_quantile Source code
.tulpa_ess_sd Source code
.tulpa_ess_tail Source code
.tulpa_eta_draws Source code
.tulpa_eta_draws_grid Source code
.tulpa_eta_draws_sampler Source code
.tulpa_eta_loglik Source code
.tulpa_exact_moments Source code
.tulpa_fill_names Source code
.tulpa_fit_fields Source code
.tulpa_fit_spatial_field Source code
.tulpa_fit_temporal_field Source code
.tulpa_fitter_args Source code
.tulpa_fixed_design Source code
.tulpa_fold Source code
.tulpa_gamma3_band Source code
.tulpa_gpd_fit Source code
.tulpa_grid_axis_lever Source code
.tulpa_grid_placement Source code
.tulpa_grid_placement_note Source code
.tulpa_grid_reliability Source code
.tulpa_grid_resolution Source code
.tulpa_grid_resolution_note Source code
.tulpa_hyper_share Source code
.tulpa_iid_param_table Source code
.tulpa_iid_param_table_empty Source code
.tulpa_inner_debias_note Source code
.tulpa_inner_k_reliability Source code
.tulpa_inner_k_summary Source code
.tulpa_inner_layer Source code
.tulpa_inner_skew_reliability Source code
.tulpa_inner_skew_summary Source code
.tulpa_inner_threads Source code
.tulpa_interval_read Source code
.tulpa_interval_read_note Source code
.tulpa_is_chain Source code
.tulpa_khat_band Source code
.tulpa_layer_state Source code
.tulpa_linpred_source Source code
.tulpa_loglik_parts Source code
.tulpa_loglik_r_eff Source code
.tulpa_logsumexp Source code
.tulpa_mcse_mean Source code
.tulpa_mcse_quantile Source code
.tulpa_mcse_sd Source code
.tulpa_measure_cols Source code
.tulpa_measure_eval Source code
.tulpa_nl_joint_once Source code
.tulpa_nl_joint_request Source code
.tulpa_no_draws_note Source code
.tulpa_non_chain_msg Source code
.tulpa_outer_regime Source code
.tulpa_outer_regime_note Source code
.tulpa_param_layout Source code
.tulpa_pareto_k_threads Source code
.tulpa_pbma_weights Source code
.tulpa_perf_cores Source code
.tulpa_phi_draws Source code
.tulpa_point_linpred Source code
.tulpa_pointwise_loglik Source code
.tulpa_pooled_draws Source code
.tulpa_prior_sd Source code
.tulpa_progress_format_secs Source code
.tulpa_psis_k_uncertainty Source code
.tulpa_psis_reliability Source code
.tulpa_qgpd Source code
.tulpa_rank_normalize Source code
.tulpa_re_coef_draws Source code
.tulpa_re_map Source code
.tulpa_re_point Source code
.tulpa_response_process Source code
.tulpa_rhat Source code
.tulpa_rhat_basic Source code
.tulpa_rhat_bulk Source code
.tulpa_rhat_fold Source code
.tulpa_s2z_flag_cells Source code
.tulpa_sampler_layout Source code
.tulpa_single_arm Source code
.tulpa_split_chains Source code
.tulpa_stacking_weights Source code
.tulpa_tgmrf_eval Source code
.tulpa_tgmrf_eval_mu Source code
.tulpa_tgmrf_registry_has Source code
.tulpa_thread_grant Source code
.tulpa_timer Source code
.tulpa_unconverged_cells Source code
.tulpa_unconverged_cells_note Source code
.tvc_sampler_spec Source code
.tvc_structure_or_stop Source code
.tweedie_dloglik_dphi Source code
.tweedie_loglik Source code
.tweedie_power Source code
.tweedie_series Source code
.tweedie_series_at Source code
.unique_locations Source code
.unscale_coords Source code
.validate_adjacency Source code
.validate_adjacency_arg Source code
.validate_family_compiled Source code
.validate_family_counts Source code
.validate_family_phi Source code
.validate_family_support Source code
.validate_family_zi Source code
.validate_family_zi_compiled Source code
.validate_glm_design Source code
.validate_re_idx Source code
.validate_spde_nu Source code
.validate_submodel_block Source code
.varcorr_from_conditioned Source code
.varcorr_from_draws Source code
.varcorr_from_nested_re_blocks Source code
.varcorr_from_point_sigma Source code
.varcorr_from_sigma Source code
.varcorr_residual Source code
.varying_coef_draws Source code
.varying_coef_info Source code
.warm_start_blocks Source code
.warm_start_hyper_var Source code
.warm_start_sigmas Source code
.warn_nonshared Source code
.wbic_temperature Source code
.with_preserved_seed Source code
.with_unsettled_report Source code
.within_one_band_b Source code
.wtd_grid_summary Source code
.zero_truncate Source code
.zi_backends Source code
.zi_compiled_families Source code
.zi_design Source code
.zi_pieces Source code
AIC.tulpa_fit Man page Source code
BIC.tulpa_fit Man page Source code
VarCorr Man page Source code
VarCorr.tulpa_fit Man page Source code
`$.tulpa_fit` Source code
`%||%` Source code
adjacency Man page Source code
adjacency.SpatRaster Man page Source code
adjacency.data.frame Man page Source code
adjacency.default Man page Source code
adjacency.sf Man page Source code
adjacency.stars Man page Source code
adjacency_to_csr_tulpa Source code
adjacency_to_list_tulpa Source code
agq_fit Man page Source code
apply_m_step_extra Source code
as_draws Man page Source code
as_draws.tulpa_fit Man page Source code
as_draws_array Man page Source code
as_draws_array.tulpa_fit Man page Source code
as_draws_df Man page Source code
as_draws_df.tulpa_fit Man page Source code
as_draws_matrix Man page Source code
as_draws_matrix.tulpa_fit Man page Source code
as_draws_rvars Man page Source code
as_draws_rvars.tulpa_fit Man page Source code
assert_backend_reachable Source code
assert_columns_exist Source code
auto_grid Man page Source code
auto_grid_place Man page Source code
auto_select_mode Source code
backend_is_reachable Source code
backend_supports_family Source code
bayes_R2 Man page Source code
bayes_R2.tulpa_fit Man page Source code
bridge_sampling Man page Source code
build_eta Source code
build_glmm_logpost Source code
can_use_stars Source code
categorical_accessors Man page
ccd_grid Man page Source code
ccd_to_theta Man page Source code
ccd_weights Man page Source code
check_adjacency Man page Source code
check_diagnostics Man page Source code
check_model Man page Source code
check_model.default Man page Source code
classify_theta Source code
coef.summary.tulpa_fit Man page Source code
coef.tulpa_fit Man page Source code
coef.tulpa_ordinal Man page Source code
collect_additive_terms Source code
compare_models Man page Source code
compute_bym2_scale Source code
compute_car_rho_bounds Source code
compute_nngp_neighbors Man page Source code
compute_rsr_projection Source code
confint.tulpa_fit Man page Source code
cpo Man page Source code
cpo.default Man page Source code
cpo.tulpa_fit Man page Source code
cpp_aghq_blups Source code
cpp_aghq_fail_penalty Source code
cpp_aghq_make_rclosure_oracle Source code
cpp_aghq_objective Source code
cpp_aghq_objective_grad Source code
cpp_available_ram_bytes Source code
cpp_brasil_approx Source code
cpp_cell_coupling_curvature3 Source code
cpp_cell_coupling_evaluate Source code
cpp_cell_coupling_registry_has Source code
cpp_cell_coupling_registry_size Source code
cpp_cornish_fisher_bands Source code
cpp_cornish_fisher_quantile Source code
cpp_crt_mean Source code
cpp_family_ad_terms Source code
cpp_family_compiled_zi_supported Source code
cpp_family_compiled_zi_supported_families Source code
cpp_family_curvature_deta Source code
cpp_family_curvature_deta2 Source code
cpp_family_curvature_deta2_vec Source code
cpp_family_curvature_deta_vec Source code
cpp_family_has_curvature_2nd_derivative Source code
cpp_family_has_curvature_derivative Source code
cpp_family_has_exact_mode_jacobian Source code
cpp_family_has_obs_curvature_2nd_derivative Source code
cpp_family_has_obs_curvature_delta_derivative Source code
cpp_family_has_zi_curvature_2nd_derivative Source code
cpp_family_has_zi_curvature_derivative Source code
cpp_family_has_zi_phi_deriv Source code
cpp_family_obs_curvature_delta_deta_vec Source code
cpp_family_obs_curvature_delta_vec Source code
cpp_family_obs_curvature_deta2 Source code
cpp_family_obs_terms Source code
cpp_family_obs_weight Source code
cpp_family_terms Source code
cpp_family_working_weight_is_observed Source code
cpp_flatten_3d_rowmajor Source code
cpp_get_max_threads Source code
cpp_glmm_elt_terms Source code
cpp_glmm_oracle_make Source code
cpp_gp_cov_value Source code
cpp_gp_field_predict Source code
cpp_gpu_available Source code
cpp_gpu_backend_kind Source code
cpp_gpu_batched_cholesky_solve Source code
cpp_gpu_info Source code
cpp_hsgp_basis_2d Source code
cpp_hsgp_field_predict Source code
cpp_hyperprior_log_density Source code
cpp_interval_gaussian_terms Source code
cpp_joint_inner_vcov_blocks Source code
cpp_joint_inner_vcov_mixture Source code
cpp_laplace_fit_bym2 Source code
cpp_laplace_fit_car_proper Source code
cpp_laplace_fit_gp Source code
cpp_laplace_fit_hsgp Source code
cpp_laplace_fit_multi_re Source code
cpp_laplace_fit_spatial Source code
cpp_laplace_fit_spde Source code
cpp_laplace_fit_spde_precomputed Source code
cpp_laplace_log_marginal_multi_re_batch Source code
cpp_laplace_spec_test_gaussian Source code
cpp_laplace_spec_test_gaussian2p Source code
cpp_laplace_spec_test_multi_re Source code
cpp_line_search_probe Source code
cpp_link_ladder Source code
cpp_mclmc_test Source code
cpp_multinomial_logit_terms Source code
cpp_nested_laplace_bym2 Source code
cpp_nested_laplace_car_proper Source code
cpp_nested_laplace_hsgp Source code
cpp_nested_laplace_icar Source code
cpp_nested_laplace_joint_multi Source code
cpp_nested_laplace_joint_multi_batch Source code
cpp_nested_laplace_multi Source code
cpp_nested_laplace_nngp Source code
cpp_nested_laplace_spde Source code
cpp_nested_laplace_st_bym2 Source code
cpp_nested_laplace_st_car_proper Source code
cpp_nested_laplace_st_hsgp Source code
cpp_nested_laplace_st_icar Source code
cpp_nested_laplace_st_nngp Source code
cpp_nested_laplace_temporal Source code
cpp_nested_laplace_test_occupancy_likelihood Source code
cpp_newton_converged_probe Source code
cpp_newton_trust_probe Source code
cpp_nl_lq_group_cdf Source code
cpp_pc_prior_scales Source code
cpp_performance_core_count Source code
cpp_pg_binomial_gibbs Source code
cpp_pg_binomial_gibbs_bym2 Source code
cpp_pg_binomial_gibbs_gp Source code
cpp_pg_binomial_gibbs_gp_rsr Source code
cpp_pg_binomial_gibbs_multiscale_gp Source code
cpp_pg_binomial_gibbs_rsr Source code
cpp_pg_binomial_gibbs_spatial Source code
cpp_pg_binomial_gibbs_temporal Source code
cpp_pg_negbin_gibbs Source code
cpp_pg_negbin_gibbs_spatial Source code
cpp_portable_math Source code
cpp_profile_enable Source code
cpp_profile_read Source code
cpp_profile_reset Source code
cpp_psis_loo_pit Source code
cpp_re_cov_gibbs_sweep Source code
cpp_recov_block_grad Source code
cpp_register_test_bivariate_gaussian_coupling Source code
cpp_register_test_occupancy_mixture_coupling Source code
cpp_register_test_separable_bernoulli_coupling Source code
cpp_register_test_weighted_gaussian_coupling Source code
cpp_rpg Source code
cpp_rpg1 Source code
cpp_rpg_real Source code
cpp_s2z_densify_max Source code
cpp_sample_crt Source code
cpp_sample_crt_sum Source code
cpp_selected_inversion_diagonal Source code
cpp_smc_test Source code
cpp_sobol_max_dim Source code
cpp_sobol_points Source code
cpp_spatial_partition_probe Source code
cpp_spde_field_se Source code
cpp_spde_fractional_logmarginal Source code
cpp_spde_hyper_prior_probe Source code
cpp_spde_laplace_gradient Source code
cpp_spde_layout_probe Source code
cpp_spde_nc_apply_probe Source code
cpp_spde_prior_probe Source code
cpp_spde_rational_roots Source code
cpp_stochastic_log_determinant Source code
cpp_test_ar1_log_density Source code
cpp_test_ar1_omr2_slope Source code
cpp_test_arena_custom_backward Source code
cpp_test_autodiff_division Source code
cpp_test_autodiff_exp_chain Source code
cpp_test_autodiff_gradient Source code
cpp_test_autodiff_inv_logit Source code
cpp_test_autodiff_lgamma Source code
cpp_test_autodiff_log Source code
cpp_test_autodiff_log1p Source code
cpp_test_autodiff_log_likelihood Source code
cpp_test_autodiff_log_sum_exp Source code
cpp_test_autodiff_logit Source code
cpp_test_autodiff_negbin_loglik Source code
cpp_test_autodiff_pow Source code
cpp_test_autodiff_softplus Source code
cpp_test_autodiff_sqrt Source code
cpp_test_axpy Source code
cpp_test_binomial_loglik Source code
cpp_test_bounded_from_logit Source code
cpp_test_c_abi_chains_roundtrip Source code
cpp_test_c_abi_resume_roundtrip Source code
cpp_test_ccallable_resolves Source code
cpp_test_chol_factor Source code
cpp_test_chol_nc_chain_rule Source code
cpp_test_cholesky Source code
cpp_test_compute_cov Source code
cpp_test_compute_linear_predictors Source code
cpp_test_compute_u_eff Source code
cpp_test_correlation_from_L Source code
cpp_test_dcov_dphi Source code
cpp_test_divergence_predicates Source code
cpp_test_dot_product Source code
cpp_test_fastmath Source code
cpp_test_funnel_nuts Source code
cpp_test_gp_layout_anchor_check Source code
cpp_test_gp_nngp_twins Source code
cpp_test_gp_solver_dispatch Source code
cpp_test_grid_factor_bytes Source code
cpp_test_hamiltonian Source code
cpp_test_hessian_pattern_guard Source code
cpp_test_hsgp_warm_start Source code
cpp_test_inv_logit Source code
cpp_test_joint_logpost_grad Source code
cpp_test_joint_pattern Source code
cpp_test_laplace_binomial Source code
cpp_test_laplace_gaussian Source code
cpp_test_laplace_negbin Source code
cpp_test_laplace_poisson Source code
cpp_test_laplace_sample Source code
cpp_test_leapfrog Source code
cpp_test_lgamma Source code
cpp_test_linalg_log_sum_exp Source code
cpp_test_linalg_log_sum_exp_vec Source code
cpp_test_linalg_matvec Source code
cpp_test_linalg_matvec_add Source code
cpp_test_linalg_matvec_transpose Source code
cpp_test_lkj_build_L Source code
cpp_test_lkj_density Source code
cpp_test_lkj_grad Source code
cpp_test_lkj_raw_from_L Source code
cpp_test_log_det_signal Source code
cpp_test_log_jacobian_bounded Source code
cpp_test_log_prior_icar Source code
cpp_test_log_prior_log_sigma2_half_cauchy Source code
cpp_test_log_prior_range_pc Source code
cpp_test_log_prior_range_pc_at_log Source code
cpp_test_log_sum_exp Source code
cpp_test_lowrank_mass_apply Source code
cpp_test_lowrank_mass_momentum Source code
cpp_test_lse_guard Source code
cpp_test_margin_mass_term Source code
cpp_test_matvec Source code
cpp_test_mcar_prior Source code
cpp_test_miid_prior Source code
cpp_test_msgp_nngp_nc_grad Source code
cpp_test_multiscale_temporal_log_lik Source code
cpp_test_nan_gradient_nuts Source code
cpp_test_negbin_loglik Source code
cpp_test_negbin_loglik_eta Source code
cpp_test_nl_field_seed Source code
cpp_test_nngp_cond_cores Source code
cpp_test_nngp_moments Source code
cpp_test_nngp_nc_grad Source code
cpp_test_nngp_prior_scatter Source code
cpp_test_norm_squared Source code
cpp_test_normal_loglik Source code
cpp_test_nuts_gradient_throws Source code
cpp_test_nuts_progress_active Source code
cpp_test_outer_thread_cap Source code
cpp_test_outer_thread_mem_budget Source code
cpp_test_parallel_dot_products Source code
cpp_test_parallel_independent Source code
cpp_test_parallel_likelihood Source code
cpp_test_pg_icar_prior Source code
cpp_test_pg_nngp_conditional Source code
cpp_test_pg_update_beta Source code
cpp_test_pg_update_re Source code
cpp_test_pg_update_sigma_re Source code
cpp_test_poisson_loglik Source code
cpp_test_rw1_quadratic_form Source code
cpp_test_rw2_quadratic_form Source code
cpp_test_s2z_block_schur Source code
cpp_test_s2z_precision Source code
cpp_test_scalar_guard Source code
cpp_test_scale Source code
cpp_test_smc_cabi Source code
cpp_test_softmax Source code
cpp_test_softmax_inplace Source code
cpp_test_sparse_laplacian_quadform Source code
cpp_test_spde_assemble Source code
cpp_test_spde_nc_transform_Q Source code
cpp_test_spde_nc_transform_fwd Source code
cpp_test_spde_nc_transform_grad Source code
cpp_test_st_hsgp_log_prior Source code
cpp_test_st_iv_gmrf_mass Source code
cpp_test_st_iv_layout Source code
cpp_test_st_iv_log_post Source code
cpp_test_st_iv_log_prior Source code
cpp_test_st_iv_nuts Source code
cpp_test_st_trend_precision Source code
cpp_test_sum_to_zero_penalty Source code
cpp_test_svc_nngp_nc_grad Source code
cpp_test_svc_nngp_twins Source code
cpp_test_temporal_gp_density Source code
cpp_test_temporal_grad_equiv Source code
cpp_test_temporal_log_prior Source code
cpp_test_temporal_rank Source code
cpp_test_tgmrf_block_pattern Source code
cpp_test_tgmrf_block_spec Source code
cpp_test_tri_solve Source code
cpp_test_update_spatial_icar Source code
cpp_test_vector_sum Source code
cpp_tgmrf_eval Source code
cpp_tgmrf_eval_mu Source code
cpp_tgmrf_nuts_joint Source code
cpp_tgmrf_registry_has Source code
cpp_tgmrf_registry_size Source code
cpp_total_ram_bytes Source code
cpp_truncated_gaussian_terms Source code
cpp_tulpa_fit_beta_nuts Source code
cpp_tulpa_fit_generic Source code
cpp_tulpa_fit_generic_chains Source code
cpp_tulpa_fit_spde_nuts Source code
cpp_tulpa_glmm_eta_draws Source code
cpp_tulpa_glmm_layout Source code
cpp_tulpa_glmm_log_prob_draws Source code
cpp_tulpa_pit Source code
cpp_tulpa_psis Source code
cpp_tulpa_sample_glmm Source code
cpp_vi_convergence_replay Source code
cpp_vi_elbo_grad Source code
cpp_zi_mixture_curvature Source code
cpp_zi_mixture_curvature_deriv Source code
cpp_zi_mixture_curvature_deriv2 Source code
cpp_zi_mixture_phi_deriv Source code
create_map Source code
create_point_map Source code
create_raster_map Source code
criteria_doors Man page
decompose_bar_lhs Source code
diagnostic_summary Man page Source code
diagnostics Man page Source code
diagnostics.default Man page Source code
diagnostics.sbc Man page Source code
dic Man page Source code
dic.default Man page Source code
dic.tulpa_fit Man page Source code
dispatch_gibbs_spatial Source code
dispatch_gibbs_temporal Source code
dispatch_laplace_spatial Source code
draw_theta_from_priors Source code
durbin_watson Man page Source code
energy_bfmi Man page Source code
ep_fit Source code
extract_coords Source code
extract_coords_from_fit Source code
family_loglik Source code
family_mean Source code
family_names Man page Source code
family_response_mean Source code
family_sample Source code
family_score_eta Source code
family_variance Source code
family_weight Source code
field_effects Man page Source code
find_latent_terms Source code
find_special_terms Source code
findbars Man page Source code
fit_spde Man page Source code
fit_spde_nested_ccd Source code
fit_spde_nested_grid Source code
fit_st_nested Man page Source code
fitted.tulpa_categorical Man page Source code
fitted.tulpa_fit Man page Source code
fixef Man page Source code
fixef.tulpa_fit Man page Source code
format.tulpa_prior Man page Source code
format.tulpa_prior_beta Man page Source code
format.tulpa_prior_exponential Man page Source code
format.tulpa_prior_gamma Man page Source code
format.tulpa_prior_half_cauchy Man page Source code
format.tulpa_prior_half_normal Man page Source code
format.tulpa_prior_normal Man page Source code
format.tulpa_prior_pc Man page Source code
format_re_lhs Source code
gauss_hermite_prob Source code
get_backend_tier Source code
get_draws_array Source code
get_mode_backends Source code
get_palette_scale Source code
geweke_test Man page Source code
glance Man page
glance.tulpa_fit Man page Source code
glmm_weights Source code
gp_cov_type Source code
grep_params Source code
hyper_axis_spec Man page Source code
imh_laplace Man page Source code
inference_mode_info Man page Source code
is_auto_grid Man page Source code
is_connected Source code
laplace_car_proper_at Source code
laplace_gp_at Source code
laplace_hsgp_at Source code
laplace_spde_at Source code
latent Man page Source code
latent_factor Man page Source code
latent_factors Man page Source code
latent_factors.default Man page Source code
link_names Source code
logLik.tulpa_fit Man page Source code
logmeanexp Source code
logsumexp_pair Source code
loo.tulpa_fit Man page Source code
mala Man page Source code
mcmc_draws Man page Source code
model_average Man page Source code
moran_i Man page Source code
n_divergent Man page Source code
no_latent_terms Source code
no_special_terms Source code
nobars Man page Source code
nobs.tulpa_fit Man page Source code
node_index Man page Source code
normalize_formulas Source code
parse_bar_term Source code
pathfinder Man page Source code
pit_residuals Man page Source code
pit_residuals.default Man page Source code
plot.sbc Man page Source code
plot.tulpa_fit Man page Source code
plot.tulpa_prior_predict Man page Source code
plot.tulpa_st_summary Man page Source code
plot.tulpa_svc_posterior Man page Source code
plot.tulpa_temporal_posterior Man page Source code
plot.tulpa_tvc_posterior Man page Source code
plot.tulpa_variogram Man page Source code
plot_acf Man page Source code
plot_acf_base Source code
plot_diagnostics Man page Source code
plot_divergences Man page Source code
plot_divergences_parcoord Source code
plot_divergences_parcoord_base Source code
plot_divergences_scatter Source code
plot_energy Man page Source code
plot_energy_base Source code
plot_ess Man page Source code
plot_ess_base Source code
plot_map Man page Source code
plot_map_panel Man page Source code
plot_pairs Man page Source code
plot_pairs_base Source code
plot_rhat Man page Source code
plot_rhat_base Source code
pointwise_loglik Man page Source code
pointwise_loglik.default Man page Source code
pointwise_loglik.tulpa_fit Man page Source code
post_hoc_lm Man page Source code
posterior_predict Man page Source code
posterior_predict.tulpa_categorical Man page Source code
posterior_predict.tulpa_fit Man page Source code
posterior_sample Man page Source code
pp_check Man page Source code
pp_check.tulpa_categorical Man page Source code
pp_check.tulpa_fit Man page Source code
pp_check_single Source code
predict.tulpa_categorical Man page Source code
predict.tulpa_fit Man page Source code
prepare_coords Source code
prepare_map_data_from_df Source code
prepare_map_data_from_fit Source code
print.laplace_diagnostics Man page Source code
print.post_hoc_lm Man page Source code
print.sbc Man page Source code
print.sbc_summary Man page Source code
print.summary.tulpa_fit Man page Source code
print.tgmrf Man page Source code
print.tulpa_adjacency Man page Source code
print.tulpa_adjacency_check Man page Source code
print.tulpa_criteria Man page Source code
print.tulpa_diagnostic_summary Man page Source code
print.tulpa_family Man page Source code
print.tulpa_fit Man page Source code
print.tulpa_geweke Man page Source code
print.tulpa_gp Man page Source code
print.tulpa_hsgp Man page Source code
print.tulpa_hyper_axis_spec Man page Source code
print.tulpa_latent Man page Source code
print.tulpa_multinomial Man page Source code
print.tulpa_multiscale Man page Source code
print.tulpa_nested_laplace Man page Source code
print.tulpa_nested_laplace_joint Man page Source code
print.tulpa_nested_laplace_joint_multi Man page Source code
print.tulpa_ordinal Man page Source code
print.tulpa_parsed_formula Man page Source code
print.tulpa_prior Man page Source code
print.tulpa_prior_predict Man page Source code
print.tulpa_priors Man page Source code
print.tulpa_rsr Man page Source code
print.tulpa_simulate Man page Source code
print.tulpa_spatial Source code
print.tulpa_spatial_field Man page Source code
print.tulpa_spatial_field_fit Man page Source code
print.tulpa_st_nested Man page Source code
print.tulpa_st_summary Man page Source code
print.tulpa_svc Man page Source code
print.tulpa_svc_posterior Man page Source code
print.tulpa_svc_summary Man page Source code
print.tulpa_temporal Source code
print.tulpa_temporal_field Man page Source code
print.tulpa_temporal_field_fit Man page Source code
print.tulpa_temporal_gp Man page Source code
print.tulpa_temporal_latent_block Man page Source code
print.tulpa_temporal_multiscale Man page Source code
print.tulpa_temporal_posterior Man page Source code
print.tulpa_temporal_summary Man page Source code
print.tulpa_tvc Man page Source code
print.tulpa_tvc_posterior Man page Source code
print.tulpa_tvc_summary Man page Source code
print.tulpa_variogram Man page Source code
print.tulpa_wbic Man page Source code
print_prior Source code
prior_beta Man page Source code
prior_exponential Man page Source code
prior_from_spec Man page Source code
prior_gamma Man page Source code
prior_half_cauchy Man page Source code
prior_half_normal Man page Source code
prior_normal Man page Source code
prior_pc Man page Source code
prior_predict Man page Source code
priors_default Man page Source code
ranef Man page Source code
ranef.tulpa_fit Man page Source code
rational_spde_coefficients Source code
re_cov_pc_lkj_prior Man page Source code
recov_posterior_sbc Source code
recov_sbc Source code
reexports Man page
residuals.tulpa_categorical Man page Source code
residuals.tulpa_fit Man page Source code
resolve_backend_fitter Source code
resolve_group_factor Source code
resolve_group_rhs Source code
rprior Source code
rubins_pool Man page Source code
sbc Man page Source code
sbc.character Man page Source code
sbc.default Man page Source code
sbc_crossing_prob Source code
sbc_crps Source code
sbc_crps_compare Source code
sbc_crps_integral Source code
sbc_crps_mc Source code
sbc_discrete Man page Source code
sbc_draws Man page Source code
sbc_ecdf_band Source code
sbc_ecdf_dev Source code
sbc_ecdf_inside Source code
sbc_ecdf_test Source code
sbc_fold Source code
sbc_mixture Man page Source code
sbc_normal Man page Source code
sbc_pit Source code
sbc_predictive Man page
sbc_rank Man page Source code
sbc_report Source code
sbc_sample Source code
select_backend_for_mode Source code
select_inference_mode Source code
select_main_params Man page Source code
sim_spatial_effects Source code
simulate.tulpa_fit Man page Source code
smooth_effects Man page Source code
sn_cdf Man page Source code
sn_match Man page Source code
sn_quantile Man page Source code
spatial Man page Source code
spatial_bym2 Man page Source code
spatial_car Man page Source code
spatial_car_proper Man page Source code
spatial_gp Man page Source code
spatial_multiscale Man page Source code
spatial_range Man page Source code
spatial_rsr Man page Source code
spatial_spde Man page Source code
spatial_spde_custom Man page Source code
spatial_svc Man page Source code
spatiotemporal Man page Source code
spatiotemporal_effects Man page Source code
spatiotemporal_effects.default Man page Source code
spatiotemporal_gp Man page Source code
spectrum0_ar Source code
summary.sbc Man page Source code
summary.tgmrf Man page Source code
summary.tulpa_fit Man page Source code
summary.tulpa_svc_posterior Man page Source code
summary.tulpa_temporal_posterior Man page Source code
summary.tulpa_tvc_posterior Man page Source code
svc Man page Source code
svc.tulpa_fit Man page Source code
temporal Man page Source code
temporal.tulpa_fit Man page Source code
temporal_ar Man page Source code
temporal_ar1 Man page Source code
temporal_ar2 Man page Source code
temporal_corr Man page Source code
temporal_gp Man page Source code
temporal_multiscale Man page Source code
temporal_rtr Man page Source code
temporal_rw1 Man page Source code
temporal_rw2 Man page Source code
temporal_tvc Man page Source code
test_dispersion Man page Source code
test_dispersion.default Man page Source code
test_outliers Man page Source code
test_outliers.default Man page Source code
test_uniformity Man page Source code
test_zero_inflation Man page Source code
test_zero_inflation.default Man page Source code
tgmrf Man page Source code
tgmrf_cpp Man page Source code
theme_tulpa Source code
theta_from_fit Source code
tidy Man page
tidy.tulpa_fit Man page Source code
tulpa Man page Source code
tulpa-envvars Man page
tulpa-package Man page
tulpa_bar_field_replicate Man page Source code
tulpa_bar_field_specs Man page Source code
tulpa_batched_pareto_k Man page Source code
tulpa_build_model_data Man page Source code
tulpa_cache_clear Man page Source code
tulpa_cache_dir Man page Source code
tulpa_check_control Man page Source code
tulpa_criteria Man page Source code
tulpa_diagnostics Man page
tulpa_dispatch Source code
tulpa_draws_array Man page Source code
tulpa_eb Man page Source code
tulpa_em_laplace Man page Source code
tulpa_em_mc Man page Source code
tulpa_ep Man page Source code
tulpa_family Man page Source code
tulpa_fit_summary Man page Source code
tulpa_formula Man page
tulpa_gaussian Man page Source code
tulpa_get_integrator_cpp Source code
tulpa_gibbs Man page Source code
tulpa_grid_axis Man page Source code
tulpa_grid_log_quad Man page Source code
tulpa_hyper_check_copy_slab Man page Source code
tulpa_hyper_copy_slab_density Man page Source code
tulpa_hyper_draws Man page Source code
tulpa_hyper_grid Man page Source code
tulpa_hyper_grid_supports Man page Source code
tulpa_hyper_slice_home Man page Source code
tulpa_integrator Man page Source code
tulpa_is_spatial_bar Man page Source code
tulpa_iter_progress Man page Source code
tulpa_joint_axis_specs_from_grid Man page Source code
tulpa_joint_grid_batch Man page Source code
tulpa_joint_inner_vcov_blocks Man page Source code
tulpa_joint_inner_vcov_mixture Man page Source code
tulpa_kfold Man page Source code
tulpa_laplace Man page Source code
tulpa_laplace_beta Man page Source code
tulpa_latent Man page
tulpa_loglik Man page Source code
tulpa_multinomial Man page Source code
tulpa_nested_laplace Man page Source code
tulpa_nested_laplace_joint Man page Source code
tulpa_nl_joint_batch Source code
tulpa_nl_joint_single Source code
tulpa_normalise_weights_safe Man page Source code
tulpa_nuts_beta Man page Source code
tulpa_nuts_spde Man page Source code
tulpa_ordinal Man page Source code
tulpa_outer_grid Man page Source code
tulpa_parse_formula Man page Source code
tulpa_pit Man page Source code
tulpa_posterior_draws Man page Source code
tulpa_posterior_draws.default Man page Source code
tulpa_posterior_draws.tulpa_nested_laplace Man page Source code
tulpa_posterior_draws.tulpa_nested_laplace_joint Man page Source code
tulpa_powerscale_sensitivity Man page Source code
tulpa_priors Man page Source code
tulpa_profile Man page Source code
tulpa_psis Man page Source code
tulpa_re_aghq Man page Source code
tulpa_re_cov_gibbs Man page Source code
tulpa_re_cov_nested Man page Source code
tulpa_reloo Man page Source code
tulpa_rpg Man page Source code
tulpa_sample_glmm Source code
tulpa_set_integrator_cpp Source code
tulpa_simulate Man page Source code
tulpa_spatial Man page
tulpa_spde_log_hyperprior Man page Source code
tulpa_spde_precision_Q Man page Source code
tulpa_temporal Man page
tulpa_tgmrf Man page Source code
tulpa_theta_matrix Man page Source code
tulpa_validate Man page
tulpa_variogram Man page Source code
tulpa_version Source code
tvc Man page Source code
tvc.tulpa_fit Man page Source code
validate_family Source code
validate_gp Man page Source code
validate_hsgp Source code
validate_mode Man page Source code
validate_prior Source code
validate_spatial Source code
validate_svc Source code
validate_temporal Source code
validate_temporal_gp Source code
validate_temporal_multiscale Man page Source code
validate_theta Source code
validate_tvc Source code
vcov.tulpa_fit Man page Source code
waic.tulpa_fit Man page Source code
wbic Man page Source code
wbic.default Man page Source code
wbic.tulpa_fit Man page Source code
with_tulpa_integrator Man page Source code
zi_loglik Source code
zi_neg_hessian Source code
zi_response_mean Source code
zi_sample Source code
zi_score_eta Source code
zi_variance Source code
tulpa documentation built on Oct. 19, 2026, 5:09 p.m.