twoStageGwasPower: Compute thresholds and power for two-stage gwas

This program computes thresholds and power for a two-stage genome-wide association study. It follows the methods described in Skol AD, Scott, LJ, Abecasis GR, Boehnke M (2006) Nature Genetics doi:10.1038/ng1706 and in the "CaTS" computer program (http://www.sph.umich.edu/csg/abecasis/CaTS/)

Author
Dirk F Moore <dirkfmoore@gmail.com>
Date of publication
2012-09-01 17:04:59
Maintainer
Dirk F Moore <dirkfmoore@gmail.com>
License
GPL (>= 2)
Version
0.99.0

View on CRAN

Man pages

twoStageGwasPower
thresholds and power for two-stage gwas
twoStageGwasPower-package
Power and critical values for a two-stage genome-wide...
twoStageNull
thresholds for two-stage gwas

Files in this package

twoStageGwasPower
twoStageGwasPower/MD5
twoStageGwasPower/R
twoStageGwasPower/R/twoStagePower.R
twoStageGwasPower/R/twoStageNull.R
twoStageGwasPower/R/twoStageGwasPower.R
twoStageGwasPower/R/termsInt.R
twoStageGwasPower/R/termsInt.alt.R
twoStageGwasPower/R/print.twoStageNull.R
twoStageGwasPower/R/print.twoStageGwasPower.R
twoStageGwasPower/R/p.joint.fun.R
twoStageGwasPower/R/p.joint.fun.alt.R
twoStageGwasPower/R/genotypingSavings.R
twoStageGwasPower/R/freqConvert.R
twoStageGwasPower/R/find.p.joint.R
twoStageGwasPower/R/find.p.joint.alt.R
twoStageGwasPower/R/find.p.joint.alpha.R
twoStageGwasPower/R/condnorm.R
twoStageGwasPower/NAMESPACE
twoStageGwasPower/man
twoStageGwasPower/man/twoStageNull.Rd
twoStageGwasPower/man/twoStageGwasPower.Rd
twoStageGwasPower/man/twoStageGwasPower-package.Rd
twoStageGwasPower/man/twoStageGwasPower-internal.rd
twoStageGwasPower/DESCRIPTION