drug.resistome.stochastic: drug.resistome.stochastic
In uCAREChemSuiteCLI: Resistome Predicter

Description Usage Arguments Details Value Examples

Takes structure data file (SDF) of candidate drug to predict its resistome using stochastic model.

1	drug.resistome.stochastic("sdf", "NearestNeighbor", "Threshold", "Organism")

`sdf`	input sdf file
`NearestNeighbor`	Nearest Neighbor = 1, 3
`Threshold`	Threshold = 0.25, 0.3, 0.35, 0.4
`Organism`	Escherichia coli = 1, Pseudomonas aeruginosa = 2

uCAREChemSuiteCLI

Predicted resistome of the candidate drug using Nearest Neighbor algorithm

{
example.resistome.stochastic<- system.file('extdata/example.sdf', package="uCAREChemSuiteCLI")
drug.resistome.stochastic(example.resistome.stochastic, "3", "0.25", "1")
}