uniqtag: Abbreviate Strings to Short, Unique Identifiers
Version 1.0

For each string in a set of strings, determine a unique tag that is a substring of fixed size k unique to that string, if it has one. If no such unique substring exists, the least frequent substring is used. If multiple unique substrings exist, the lexicographically smallest substring is used. This lexicographically smallest substring of size k is called the "UniqTag" of that string.

AuthorShaun Jackman [cre]
Date of publication2015-04-29 01:17:59
MaintainerShaun Jackman <sjackman@gmail.com>
LicenseMIT + file LICENSE
Version1.0
URL https://github.com/sjackman/uniqtag
Package repositoryView on CRAN
InstallationInstall the latest version of this package by entering the following in R:
install.packages("uniqtag")

Getting started

Package overview
README.md

Popular man pages

cumcount: Cumulative count of strings.
kmers_of: Return the k-mers of a string.
make_unique: Make character strings unique.
uniqtag: Abbreviate strings to short, unique identifiers.
uniqtag-package: Abbreviate strings to short, unique identifiers.
See all...

All man pages Function index File listing

Man pages

cumcount: Cumulative count of strings.
kmers_of: Return the k-mers of a string.
make_unique: Make character strings unique.
uniqtag: Abbreviate strings to short, unique identifiers.
uniqtag-package: Abbreviate strings to short, unique identifiers.

Functions

cumcount Man page Source code
kmers_of Man page Source code
make_unique Man page Source code
make_unique_all Man page Source code
make_unique_all_or_none Man page Source code
make_unique_duplicates Man page Source code
uniqtag Man page Source code
uniqtag-package Man page
vkmers_of Man page Source code

Files

tests
tests/testthat.R
tests/testthat
tests/testthat/test-kmers-of.R
tests/testthat/test-make-unique.R
tests/testthat/test-uniqtag.R
NAMESPACE
R
R/uniqtag.R
README.md
MD5
DESCRIPTION
man
man/kmers_of.Rd
man/cumcount.Rd
man/uniqtag-package.Rd
man/uniqtag.Rd
man/make_unique.Rd
LICENSE
uniqtag documentation built on May 19, 2017, 6:57 a.m.

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