vegan3d is an R package of 3D plotting routines split apart from vegan. It can be used for dynamic plots based on rgl package, and for static 3D plots based on scatterplot3d package.
The package contains the following functions:
ordirgl
with its support functions orglpoints
, orgltext
, orglsegments
,
orglellipse
, orglspider
, orglcluster
and orglspantree
. These
require rgl package and provide dynamic ordination graphics.
rgl based support functions rgl.isomap
to display isomap
results, and rgl.renyiaccum
to display renyiaccum
results.
ordiplot3d
for static 3D ordination diagrams. This requires
scatterplot3d package.
orditree3d
and ordirgltree
functions to display a coloured
dendrogram tree over a 2D plane. The first is a
static function based on scatterplot3d and the latter a
dynamic spinnable plot based on rgl. The method was initially
designed for showing dendrograms over ordination plane
but it can use other planes, for instance a map of locations of points.
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