Files in vennDiagramLab

Headless Venn Diagram Analysis and Rendering

MD5

NEWS.md README.md

NAMESPACE

DESCRIPTION

LICENSE

R/render-svg.R R/ggplot-layer.R R/classes.R R/tsv-export.R R/broom-tidy.R R/analysis.R R/zzz.R R/io.R R/samples.R R/render-upset.R R/proportional.R R/render-network.R R/statistics.R R/errors.R R/render-pdf.R

inst/CITATION

inst/WORDLIST

inst/doc/v02_real_cancer_drivers.Rmd inst/doc/v06_pipeline_integration.Rmd inst/doc/v06_pipeline_integration.R inst/doc/v04_upset_vs_venn_vs_network.Rmd inst/doc/v08_custom_styling_and_export.Rmd

inst/doc/v03_proportional_diagrams.html

inst/doc/v03_proportional_diagrams.R inst/doc/v07_pdf_reports.Rmd inst/doc/v05_statistics_deep_dive.R inst/doc/v01_quickstart.R

inst/doc/v06_pipeline_integration.html

inst/doc/v01_quickstart.html

inst/doc/v02_real_cancer_drivers.html

inst/doc/v04_upset_vs_venn_vs_network.R inst/doc/v03_proportional_diagrams.Rmd inst/doc/v07_pdf_reports.R inst/doc/v02_real_cancer_drivers.R

inst/doc/v07_pdf_reports.html

inst/doc/v04_upset_vs_venn_vs_network.html

inst/doc/v05_statistics_deep_dive.Rmd inst/doc/v08_custom_styling_and_export.R

inst/doc/v05_statistics_deep_dive.html

inst/doc/v01_quickstart.Rmd

inst/doc/v08_custom_styling_and_export.html

inst/extdata/models/json/venn-5e-set-euler.json

inst/extdata/models/json/venn-8d-set-bannier.json

inst/extdata/models/json/venn-3-set.json

inst/extdata/models/json/venn-5d-set-bannier.json

inst/extdata/models/json/venn-7e-set-hamilton.json

inst/extdata/models/json/venn-7a-set-edwards.json

inst/extdata/models/json/venn-6d-set-bannier.json

inst/extdata/models/json/venn-3b-set-anderson.json

inst/extdata/models/json/venn-2e-set-carroll-triangle.json

inst/extdata/models/json/venn-6b-set-anderson.json

inst/extdata/models/json/venn-7e-set-manawatu.json

inst/extdata/models/json/venn-7e-set-palmerston-north.json

inst/extdata/models/json/venn-4e-set-euler.json

inst/extdata/models/json/venn-6e-set-carroll-triangle.json

inst/extdata/models/json/venn-5f-set.json

inst/extdata/models/json/venn-8-set.json

inst/extdata/models/json/venn-3e-set-carroll-triangle.json

inst/extdata/models/json/venn-5e-set-carroll-triangle.json

inst/extdata/models/json/venn-7-set-grunbaum.json

inst/extdata/models/json/venn-4f-set.json

inst/extdata/models/json/venn-4e-set-carroll-triangle.json

inst/extdata/models/json/venn-7e-set-adelaide.json

inst/extdata/models/json/venn-5b-set-anderson.json

inst/extdata/models/json/venn-3e-set-rectangle-curved.json

inst/extdata/models/json/venn-5a-set-edwards.json

inst/extdata/models/json/venn-4a-set-edwards.json

inst/extdata/models/json/venn-9a-set-edwards.json

inst/extdata/models/json/venn-3e-set-rectangles.json

inst/extdata/models/json/venn-2e-set-rectangle.json

inst/extdata/models/json/venn-7d-set-bannier.json

inst/extdata/models/json/venn-8a-set-edwards.json

inst/extdata/models/json/venn-6-set.json

inst/extdata/models/json/venn-4b-set-anderson.json

inst/extdata/models/json/venn-4e-set-rectangle.json

inst/extdata/models/json/venn-2a-set-edwards.json

inst/extdata/models/json/venn-2-set.json

inst/extdata/models/json/venn-3a-set-edwards.json

inst/extdata/models/json/venn-7e-set-victoria.json

inst/extdata/models/json/venn-7e-set-massey.json

inst/extdata/models/json/venn-7c-set-adelaide.json

inst/extdata/models/json/venn-4-set.json

inst/extdata/models/json/venn-5e-set.json

inst/extdata/models/json/venn-6a-set-edwards.json

inst/extdata/models/json/venn-5-set-grunbaum.json

inst/extdata/models/svg/venn-5e-set-euler.svg

inst/extdata/models/svg/venn-5e-set-carroll-triangle.svg

inst/extdata/models/svg/venn-8d-set-bannier.svg

inst/extdata/models/svg/venn-5d-set-bannier.svg

inst/extdata/models/svg/venn-5-set-grunbaum.svg

inst/extdata/models/svg/venn-6-set.svg

inst/extdata/models/svg/venn-6d-set-bannier.svg

inst/extdata/models/svg/venn-2-set.svg

inst/extdata/models/svg/venn-4b-set-anderson.svg

inst/extdata/models/svg/venn-5e-set.svg

inst/extdata/models/svg/venn-3e-set-rectangles.svg

inst/extdata/models/svg/venn-7e-set-hamilton.svg

inst/extdata/models/svg/venn-7e-set-massey.svg

inst/extdata/models/svg/venn-7e-set-adelaide.svg

inst/extdata/models/svg/venn-5a-set-edwards.svg

inst/extdata/models/svg/venn-4-set.svg

inst/extdata/models/svg/venn-7-set-grunbaum.svg

inst/extdata/models/svg/names-bar.svg

inst/extdata/models/svg/venn-4e-set-rectangle.svg

inst/extdata/models/svg/venn-6a-set-edwards.svg

inst/extdata/models/svg/venn-7e-set-palmerston-north.svg

inst/extdata/models/svg/venn-4e-set-euler.svg

inst/extdata/models/svg/venn-5b-set-anderson.svg

inst/extdata/models/svg/venn-7a-set-edwards.svg

inst/extdata/models/svg/venn-3a-set-edwards.svg

inst/extdata/models/svg/venn-3b-set-anderson.svg

inst/extdata/models/svg/venn-4a-set-edwards.svg

inst/extdata/models/svg/venn-8-set.svg

inst/extdata/models/svg/venn-4e-set-carroll-triangle.svg

inst/extdata/models/svg/venn-9a-set-edwards.svg

inst/extdata/models/svg/venn-3e-set-rectangle-curved.svg

inst/extdata/models/svg/venn-2e-set-carroll-triangle.svg

inst/extdata/models/svg/venn-2a-set-edwards.svg

inst/extdata/models/svg/venn-6e-set-carroll-triangle.svg

inst/extdata/models/svg/venn-3e-set-carroll-triangle.svg

inst/extdata/models/svg/venn-5f-set.svg

inst/extdata/models/svg/venn-6b-set-anderson.svg

inst/extdata/models/svg/venn-4f-set.svg

inst/extdata/models/svg/venn-7e-set-victoria.svg

inst/extdata/models/svg/venn-3-set.svg

inst/extdata/models/svg/venn-7e-set-manawatu.svg

inst/extdata/models/svg/venn-2e-set-rectangle.svg

inst/extdata/models/svg/venn-8a-set-edwards.svg

inst/extdata/models/svg/venn-7c-set-adelaide.svg

inst/extdata/models/svg/venn-7d-set-bannier.svg

inst/extdata/samples/dataset_real_msigdb_cancer_pathways.tsv

inst/extdata/samples/dataset_mock_gene_sets.csv

inst/extdata/samples/dataset_real_cancer_drivers_4.tsv

inst/extdata/samples/dataset_real_msigdb_immune_pathways.tsv

inst/extdata/samples/dataset_mock_streaming_platforms.csv

build/vignette.rds

tests/testthat.R tests/testthat/test-analysis.R tests/testthat/test-samples.R tests/testthat/test-errors.R tests/testthat/test-statistics.R tests/testthat/test-tsv-export.R tests/testthat/test-render-pdf.R tests/testthat/test-io.R tests/testthat/test-render-upset.R tests/testthat/test-render-network.R tests/testthat/test-skeleton.R tests/testthat/test-proportional.R tests/testthat/test-render-svg.R tests/testthat/test-broom-tidy.R tests/testthat/test-parity-with-webapp.R tests/testthat/test-ggplot-layer.R tests/testthat/test-classes.R

tests/testthat/fixtures/parity/real_msigdb_immune_pathways__v4__matrix.tsv

tests/testthat/fixtures/parity/mock_streaming_platforms__v8__regions.tsv

tests/testthat/fixtures/parity/real_cancer_drivers_4__v4__matrix.tsv

tests/testthat/fixtures/parity/real_cancer_drivers_4__v4__stats.tsv

tests/testthat/fixtures/parity/mock_streaming_platforms__v8__matrix.tsv

tests/testthat/fixtures/parity/real_msigdb_cancer_pathways__v5g__regions.tsv

tests/testthat/fixtures/parity/real_msigdb_immune_pathways__v4__stats.tsv

tests/testthat/fixtures/parity/mock_gene_sets__v6__regions.tsv

tests/testthat/fixtures/parity/real_msigdb_cancer_pathways__v5g__matrix.tsv

tests/testthat/fixtures/parity/mock_streaming_platforms__v8__stats.tsv

tests/testthat/fixtures/parity/mock_gene_sets__v6__stats.tsv

tests/testthat/fixtures/parity/real_msigdb_cancer_pathways__v5g__stats.tsv

tests/testthat/fixtures/parity/real_msigdb_immune_pathways__v4__regions.tsv

tests/testthat/fixtures/parity/mock_gene_sets__v6__matrix.tsv

tests/testthat/fixtures/parity/real_cancer_drivers_4__v4__regions.tsv

vignettes/v02_real_cancer_drivers.Rmd vignettes/v06_pipeline_integration.Rmd vignettes/v04_upset_vs_venn_vs_network.Rmd vignettes/v08_custom_styling_and_export.Rmd vignettes/v07_pdf_reports.Rmd vignettes/v03_proportional_diagrams.Rmd vignettes/v05_statistics_deep_dive.Rmd vignettes/v01_quickstart.Rmd man/tidy.RegionResult.Rd man/StatisticsResult-class.Rd man/fold_enrichment.Rd man/effective_universe.Rd man/to_matrix_tsv.Rd man/to_statistics_tsv.Rd man/augment.RegionResult.Rd man/analyze.Rd man/bh_fdr.Rd man/load_gmt.Rd man/hypergeometric_p_value.Rd man/load_tsv.Rd man/geom_venn.Rd man/VennDataset-class.Rd man/glance.RegionResult.Rd man/list_samples.Rd man/load_gmx.Rd man/render_upset.Rd man/jaccard.Rd man/RegionResult-class.Rd man/overlap_coefficient.Rd man/render_network.Rd man/to_region_summary_tsv.Rd man/statistics.Rd man/solve_2set.Rd man/render_venn_svg.Rd man/to_pdf_report.Rd man/list_models.Rd man/compute_pairwise.Rd man/solve_3set.Rd man/generate_proportional_svg.Rd man/load_csv.Rd man/vdl_version.Rd man/dice.Rd man/circle_intersection_area.Rd man/RegionData-class.Rd man/load_sample.Rd

vennDiagramLab documentation built on May 19, 2026, 1:07 a.m.