This is the github repository of the viromeBrowser R package.
Required packages that cannot be installed automatically are Rsamtools and Biostrings, install using following commands:
if (!requireNamespace("BiocManager", quietly = TRUE)) install.packages("BiocManager") BiocManager::install("Rsamtools") BiocManager::install("Biostrings")
Installing the package from R should work using:
Or if there is a newer version on github:
install.packages("devtools") library(devtools) install_github("dnieuw/viromebrowser", build_vignette = TRUE)
Load the package using the following command:
Read the vignette by running:
Start the app by running
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