compareSimulations: Compares different simulations produced by...

In virtualPollen: Simulating Pollen Curves from Virtual Taxa with Different Life and Niche Traits

Compares different simulations produced by simulatePopulation.

Description

Plots together the results of different virtual taxa produced by a single run of simulatePopulation.

Usage

compareSimulations(
  simulation.output = NULL,
  species = "all",
  filename = NULL,
  columns = "Pollen",
  time.zoom = NULL,
  width = 12,
  text.size = 20,
  title.size = 25,
  plot.title = ""
  )

Arguments

simulation.output	list, output of simulatePopulation.
species	a number or vector or numbers representing rows in the parameters dataframe, or a string or vector of strings referencing to the "label" column of the parameters dataframe.
filename	character string, name of output pdf file. If NULL or empty, no pdf is produced.
columns	character string or vector of character strings with these possible values: "Pollen", "Population.mature", "Population.immature", "Population.viable.seeds", "Suitability", "Biomass.total", "Biomass.mature", "Biomass.immature", "Mortality.mature", "Mortality.immature", "Driver.A", "Driver.B".
time.zoom	vector of two numbers, indicating the beginnign and end of the time interval to be plotted (i.e. "c(5000, 10000)")
width	plot width in inches.
text.size	text size of the plot.
title.size	plot title size.
plot.title	character string to use as plot title.

Details

The user can decide what virtual taxa to plot through the species argument, and what information to show throught the columns argument. Output is plotted on screen by default, and printed to pdf if the filename argument is filled.

Author(s)

Blas M. Benito <[e-mail]>

See Also

simulatePopulation, plotSimulation

Examples

#getting example data
data(simulation)

#compare taxa 1, 2, and 3.
compareSimulations(simulation.output = simulation,
 species = c(1, 2, 3),
 columns = c("Pollen", "Suitability"),
 time.zoom = c(1000, 2000)
)

virtualPollen documentation built on March 18, 2022, 6:16 p.m.