plot_cluster_heatmaps: Draw two heatmaps

In visxhclust: A Shiny App for Visual Exploration of Hierarchical Clustering

Draw two heatmaps

Description

Draw two heatmaps

Usage

plot_cluster_heatmaps(
  top_matrix,
  bottom_matrix,
  dendrograms,
  clusters_set,
  annotation = NULL,
  scaled = FALSE,
  distance_method = NULL,
  cluster_features = TRUE,
  show_col_names = TRUE
)

Arguments

top_matrix	matrix with selected variables
bottom_matrix	matrix with unselected variables
dendrograms	to draw above top matrix
clusters_set	list of cluster indices
annotation	(optional) any kind of annotation object to draw as top_annotation
scaled	(optional) boolean to modify colour scale if data has already been scaled
distance_method	(optional) if "Binary", use discrete colors for heatmap
cluster_features	(optional) If FALSE, row order does not change
show_col_names	(optional) If FALSE, does not show column names at base of heatmap

Value

two concatenated heatmaps drawn with ComplexHeatmap::draw

visxhclust documentation built on March 31, 2023, 7:30 p.m.