treecheck: Checks a set of phylogenetic trees to confirm they are...
In windex: Analysing Convergent Evolution using the Wheatsheaf Index
treecheck R Documentation
Checks a set of phylogenetic trees to confirm they are ultrametric and binary.
Description
Takes a set of phylogenetic trees as a multiPhylo object (or a single tree as a phylo object) and reports which (if any) are not binary or ultrametric.
Usage
treecheck(trees)
Arguments
trees
Set of phylogenetic trees of class 'multiPhylo' or 'phylo' containing branch lengths.
Value
Either confirms that all trees are binary and ultrametric or prints warnings stating which trees do not meet those criteria.
Author(s)
Kevin Arbuckle
windex documentation built on Oct. 11, 2023, 5:16 p.m.
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
| treecheck | R Documentation |
Checks a set of phylogenetic trees to confirm they are ultrametric and binary.
Description
Takes a set of phylogenetic trees as a multiPhylo object (or a single tree as a phylo object) and reports which (if any) are not binary or ultrametric.
Usage
treecheck(trees)
Arguments
trees |
Set of phylogenetic trees of class 'multiPhylo' or 'phylo' containing branch lengths. |
Value
Either confirms that all trees are binary and ultrametric or prints warnings stating which trees do not meet those criteria.
Author(s)
Kevin Arbuckle
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
Embedding an R snippet on your website
Add the following code to your website.
For more information on customizing the embed code, read Embedding Snippets.