nda: Generate validated NDA submission templates created in the...
In wizaRdry: A Magical Framework for Collaborative & Reproducible Data Analysis

View source: R/ndaRequest.R

nda	R Documentation

Generate validated NDA submission templates created in the ./nda directory

Description

This function processes requests for clean data sequentially for specified measures. It makes a request to the NIH NDA API for the named data structures and runs the associated data remediation routines. It then runs a series of unit tests to verify that the data quality standards are met.

Usage

nda(
  ...,
  csv = FALSE,
  rdata = FALSE,
  spss = FALSE,
  limited_dataset = FALSE,
  skip_prompt = FALSE
)

Arguments

`...`	Strings, specifying the measures to process, which can be a Mongo collection, REDCap instrument, or Qualtrics survey.
`csv`	Optional; Boolean, if TRUE creates a .csv extract in ./tmp.
`rdata`	Optional; Boolean, if TRUE creates an .rdata extract in ./tmp.
`spss`	Optional; Boolean, if TRUE creates a .sav extract in ./tmp.
`limited_dataset`	Optional; Boolean, if TRUE does not perform date-shifting of interview_date or age-capping of interview_age
`skip_prompt`	Logical. If TRUE, skips confirmation prompts. If FALSE (default), prompts for confirmation unless the user has previously chosen to remember their preference.

Value

Prints the time taken for the data request process.

Author(s)

Joshua Kenney joshua.kenney@yale.edu

Examples

## Not run: 
  nda("prl", csv=TRUE)
  nda("rgpts", "kamin", rdata=TRUE)
  
  # Skip confirmation prompts
  nda("prl", csv=TRUE, skip_prompt=TRUE)

## End(Not run)

wizaRdry documentation built on June 8, 2025, 11:30 a.m.