View source: R/file_utilities.R
| import_merge_gamet_rb | R Documentation |
Import a ReaderBench output file (.csv) and GAMET output file (.csv), and merge the two files on ID.
import_merge_gamet_rb(rb_path, gamet_path)
rb_path |
A string giving the path and ReaderBench filename to import. |
gamet_path |
A string giving the path and GAMET filename to import. |
A base data.frame created by joining the ReaderBench and GAMET tables
by ID, with one row per matched ID and the following columns:
ID (character): identifier present in both sources.
All retained ReaderBench feature columns (numeric).
All retained GAMET error/category columns (numeric).
By default, only IDs present in both inputs are kept (inner join). If a
feature name appears in both sources, standard merge suffixes (e.g.,
.x/.y) may be applied by the join implementation.
The object has class data.frame (or tibble if converted by the user).
predict_quality
# Example with package sample data
rb_path <- system.file("extdata", "sample_rb.csv", package = "writeAlizer")
gam_path <- system.file("extdata", "sample_gamet.csv", package = "writeAlizer")
rb_gam <- import_merge_gamet_rb(rb_path, gam_path)
head(rb_gam)
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