generateR: generateR function, R package version of MultiTrans
In 2eding/MTVR: R version of MultiTrans

Description Usage Arguments Value Examples

View source: R/generateR.R

generateR function estimate correlation in the rotated space

1	generateR(X, K, VC, outPath, outName)

`X`	is the SNP matrix, individual x snp
`K`	is obtained from the Kinship function
`VC`	is obtained from the varComp function
`outPath`	is a parameter that specifies the path of the result file
`outName`	is a parameter that specifies the name of the result file

estimated correlation in the rotated space

   X <- as.matrix(read.table(SNPData))
   K <- Kinship(X, outPath, outName)
   VC <- varComp(Y, K, numThreads, outPath, outName)

   gR <- generateR(X, K, VC, outPath, outName)