Implements the algorithm described in Trapnell,C. et al. (2010) <doi: 10.1038/nbt.1621>. This function takes read counts matrix of RNASeq data, feature lengths which can be retrieved using 'biomaRt' package, and the mean fragment lengths which can be calculated using the 'CollectInsertSizeMetrics(Picard)' tool. It then returns a matrix of FPKM normalised data by library size and feature effective length. It also provides the user with a quick and reliable function to generate FPKM heatmap plot of the highly variable features in RNASeq dataset.
Package details 


Author  Ahmed Alhendi (Dr.) 
Maintainer  Ahmed Alhendi <[email protected]> 
License  GPL3 
Version  1.0 
URL  https://github.com/AAlhendi1707/countToFPKM 
Package repository  View on GitHub 
Installation 
Install the latest version of this package by entering the following in R:

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