createCmAnalysis: Create a CohortMethod analysis specification
In ABMI/Prometheus: Methods to Enable Transferring Information across OHDSI

Description Usage Arguments Details

View source: R/MetisCohortMethod.R

Create a CohortMethod analysis specification

createCmAnalysis(
  analysisId = 1,
  description = "",
  targetType = NULL,
  comparatorType = NULL,
  getDbCohortMethodDataArgs,
  createStudyPopArgs,
  createPs = FALSE,
  createPsArgs = NULL,
  trimByPs = FALSE,
  trimByPsArgs = NULL,
  trimByPsToEquipoise = FALSE,
  trimByPsToEquipoiseArgs = NULL,
  matchOnPs = FALSE,
  matchOnPsArgs = NULL,
  matchOnPsAndCovariates = FALSE,
  matchOnPsAndCovariatesArgs = NULL,
  stratifyByPs = FALSE,
  stratifyByPsArgs = NULL,
  stratifyByPsAndCovariates = FALSE,
  stratifyByPsAndCovariatesArgs = NULL,
  fitOutcomeModel = FALSE,
  fitOutcomeModelArgs = NULL,
  reduceDim = FALSE,
  reduceDimArgs = NULL
)

`analysisId`	An integer that will be used later to refer to this specific set of analysis choices.
`description`	A short description of the analysis.
`targetType`	If more than one target is provided for each drugComparatorOutcome, this field should be used to select the specific target to use in this analysis.
`comparatorType`	If more than one comparator is provided for each drugComparatorOutcome, this field should be used to select the specific comparator to use in this analysis.
`getDbCohortMethodDataArgs`	An object representing the arguments to be used when calling the `getDbCohortMethodData` function.
`createStudyPopArgs`	An object representing the arguments to be used when calling the `createStudyPopulation` function.
`createPs`	Should the `createPs` function be used in this analysis?
`createPsArgs`	An object representing the arguments to be used when calling the `createPs` function.
`trimByPs`	Should the `trimByPs` function be used in this analysis?
`trimByPsArgs`	An object representing the arguments to be used when calling the `trimByPs` function.
`trimByPsToEquipoise`	Should the `trimByPsToEquipoise` function be used in this analysis?
`trimByPsToEquipoiseArgs`	An object representing the arguments to be used when calling the `trimByPsToEquipoise` function.
`matchOnPs`	Should the `matchOnPs` function be used in this analysis?
`matchOnPsArgs`	An object representing the arguments to be used when calling the `matchOnPs` function.
`matchOnPsAndCovariates`	Should the `matchOnPsAndCovariates` function be used in this analysis?
`matchOnPsAndCovariatesArgs`	An object representing the arguments to be used when calling the `matchOnPsAndCovariates` function.
`stratifyByPs`	Should the `stratifyByPs` function be used in this analysis?
`stratifyByPsArgs`	An object representing the arguments to be used when calling the `stratifyByPs` function.
`stratifyByPsAndCovariates`	Should the `stratifyByPsAndCovariates` function be used in this analysis?
`stratifyByPsAndCovariatesArgs`	An object representing the arguments to be used when calling the `stratifyByPsAndCovariates` function.
`fitOutcomeModel`	Should the `fitOutcomeModel` function be used in this analysis?
`fitOutcomeModelArgs`	An object representing the arguments to be used when calling the `fitOutcomeModel` function.