In AGROFIMS/hagrofims: Shiny App main application for the Agronomy Field Information Management System (AgroFIMS)

r i = {{i}}

{{i+1}}. Analysis for trait r traits[i]

lc <- check.2f(traits[i], geno, env, rep, data)

r if (lc$c2 == 0) {"There is only one replication. Analysis is not possible with one replication."}

r if (lc$c2 == 1 & lc$c3 == 0) {"There is more than one datum for at least one combination of the genotypes and environments in at least one replication. This could be the result of a mislabeling for the levels of the factors. The table below shows the frequencies of valid data for each genotype and environment in each replication. Solve this to proceed."}

r if (lc$c1 == 0 & lc$c2 == 1 & lc$c3 == 1) {"There is at least one genotype without data in at least one environment. The table below shows the frequencies of valid data for each genotype in each environment. A MET analysis cannot be produced if there are combination of genotypes and environments without data. Solve this to proceed."}

r if (lc$pmis > maxp & lc$c1 == 1 & lc$c2 == 1 & lc$c3 == 1) paste("There are too many missing values (", format(lc$pmis * 100, digits = 3), "%). The table below shows the frequencies of valid data for each genotype in each environment. This procedure estimates up to 10%. Solve this to proceed.", sep = "")

if (lc$c2 == 1 & lc$c3 == 1)
  lc$tfreq
if (lc$c2 == 1 & lc$c3 == 0)
  lc$tfreqr

AGROFIMS/hagrofims documentation built on May 6, 2020, 7:43 p.m.