AdamCottrill/glfishr: Fetch fisheries assessment data from the FN Portal

glfishr contains a series of R functions that are intended to make it easy to get fisheries assessment data from the fn_portal api and into R for subsequent analysis and reporting. Functions are named semantically to reflect the FN-II table they fetch data from (e.g. get_FN011() for project meta data, get_FN121() for net set/sample data and get_FN125() for biological sample data). Most of the functions take an optional filter_list parameter that can be used to finely control which records are returned. Care has been taken to ensure that the available filters are consistent with FN-II field names whenever possible, and in many cases, filters can be re-used across different tables (e.g. - if a filter is passed to the get_FN121() function to find a subset of net sets, that same filter can be applied to the get_FN125() function to get the all of the biological samples collected in those net sets).

Getting started

Package details

Maintainer
LicenseMIT + file LICENSE
Version2024.03.20
Package repositoryView on GitHub
Installation Install the latest version of this package by entering the following in R:
install.packages("remotes")
remotes::install_github("AdamCottrill/glfishr")
AdamCottrill/glfishr documentation built on Aug. 9, 2024, 5:47 p.m.