step_tmpl_bash_script: Step template to run a bash script

In AdrienLeGuillou/slurmworkflow: Build workflows for the Slurm workload manager

Description

Step template to run a bash script

Usage

step_tmpl_bash_script(bash_script)

Arguments

bash_script

Path to the script to be run by the workflow step

Value

a template function to be used by add_workflow_step

Step Template

Step Templates are helper functions to be used within add_workflow_step. Some basic ones are provided by the slurmworkflow package. They instruct the workflow to run either a bash script, a set of bash lines given as a character vector or an R script. Additional Step Templates can be created to simplify specific tasks, see the vignette("making-a-custom-step-template") for details.

AdrienLeGuillou/slurmworkflow documentation built on Jan. 13, 2022, 5:13 p.m.