.Rbuildignore
.gitignore
DESCRIPTION
NAMESPACE
R/VSUP.R
R/acceptenceRate.R
R/bartDiag.R
R/extractTreeData.R
R/generic_functions.R
R/globals.R
R/input_data.R
R/localProcedure.R
R/mdsBart.R
R/permVimp.R
R/permVint.R
R/plotProximity.R
R/plotSingleTree.R
R/plot_all_trees.R
R/proximityMatrix.R
R/splitDensity.R
R/treeBarPlot.R
R/treeDataframe.R
R/treeDepth.R
R/treeList.R
R/treeNodes.R
R/tree_data_example.R
R/vimpBart.R
R/vimpPlot.R
R/vintPlot.R
R/viviBART.R
R/viviBartMatrix.R
R/viviBartPlot.R
README.Rmd
README.md
Vignettes/bartManVignette.Rmd
Vignettes/bartManVignette_New.log
Vignettes/bartManVignette_New.tex
Vignettes/quick_start_vignette.Rmd
badge/bartmanLogo1.png
bartMan.Rproj
bartman_vignettte_new_plots_1/accept_rate_1.png
bartman_vignettte_new_plots_1/diagnostics_1.png
bartman_vignettte_new_plots_1/dummy_trees_combine_False_1.png
bartman_vignettte_new_plots_1/dummy_trees_combined_True_1.png
bartman_vignettte_new_plots_1/heatmap_vivid_1.png
bartman_vignettte_new_plots_1/heatmap_vsup_1.png
bartman_vignettte_new_plots_1/local_procedure_Shift_1.png
bartman_vignettte_new_plots_1/local_procedure_both.png
bartman_vignettte_new_plots_1/local_procedure_noShift_1.png
bartman_vignettte_new_plots_1/mds.png
bartman_vignettte_new_plots_1/own_trees_iter_1_1.png
bartman_vignettte_new_plots_1/own_trees_iter_null_1.png
bartman_vignettte_new_plots_1/permvimp_10_1.png
bartman_vignettte_new_plots_1/permvimp_20_1.png
bartman_vignettte_new_plots_1/permvimp_5_1.png
bartman_vignettte_new_plots_1/permvimp_all.png
bartman_vignettte_new_plots_1/permvint_1.png
bartman_vignettte_new_plots_1/proximity_plot_1.png
bartman_vignettte_new_plots_1/qs_accept.png
bartman_vignettte_new_plots_1/qs_diag.png
bartman_vignettte_new_plots_1/qs_mds.png
bartman_vignettte_new_plots_1/qs_prox.png
bartman_vignettte_new_plots_1/qs_splitdensity.png
bartman_vignettte_new_plots_1/qs_treedepth.png
bartman_vignettte_new_plots_1/qs_treenode.png
bartman_vignettte_new_plots_1/qs_trees_all.png
bartman_vignettte_new_plots_1/qs_trees_barplot.png
bartman_vignettte_new_plots_1/qs_trees_depth.png
bartman_vignettte_new_plots_1/qs_trees_factor_2.png
bartman_vignettte_new_plots_1/qs_trees_factors_1.png
bartman_vignettte_new_plots_1/qs_trees_mu.png
bartman_vignettte_new_plots_1/qs_trees_response.png
bartman_vignettte_new_plots_1/qs_trees_treeno_1.png
bartman_vignettte_new_plots_1/qs_trees_var.png
bartman_vignettte_new_plots_1/qs_vsup.png
bartman_vignettte_new_plots_1/ridges_1.png
bartman_vignettte_new_plots_1/single_tree_dend_1.png
bartman_vignettte_new_plots_1/single_tree_ice_1.png
bartman_vignettte_new_plots_1/single_trees_1.png
bartman_vignettte_new_plots_1/split_density_1.png
bartman_vignettte_new_plots_1/treeDepth_1.png
bartman_vignettte_new_plots_1/treeNodes_1.png
bartman_vignettte_new_plots_1/tree_depth_node_1.png
bartman_vignettte_new_plots_1/tree_example.png
bartman_vignettte_new_plots_1/tree_fill_response_1.png
bartman_vignettte_new_plots_1/tree_quad_1.png
bartman_vignettte_new_plots_1/trees_barplot_1.png
bartman_vignettte_new_plots_1/trees_dummy_1.png
bartman_vignettte_new_plots_1/trees_fill_mu_1.png
bartman_vignettte_new_plots_1/trees_iter_1_1.png
bartman_vignettte_new_plots_1/trees_selected_1.png
bartman_vignettte_new_plots_1/trees_sorted_depth_1.png
bartman_vignettte_new_plots_1/trees_sorted_var_1.png
bartman_vignettte_new_plots_1/trees_treeNum_1_1.png
bartman_vignettte_new_plots_1/trees_treeNum_5_1.png
bartman_vignettte_new_plots_1/vimp_barplot_1.png
bartman_vignettte_new_plots_1/vimp_lvp_1.png
bartman_vignettte_new_plots_1/vimp_point_1.png
bartman_vignettte_new_plots_1/vimp_point_bar_1.png
bartman_vignettte_new_plots_1/vint_barplot_1.png
bartman_vignettte_new_plots_1/vint_point_1.png
bartman_vignettte_new_plots_1/vint_point_bar_1.png
data/input_data.RData
data/tree_data_example.RData
docs/404.html
docs/articles/bartManVignette.html
docs/articles/bartManVignette_files/header-attrs-2.10/header-attrs.js
docs/articles/bartManVignette_files/header-attrs-2.24/header-attrs.js
docs/articles/index.html
docs/authors.html
docs/bootstrap-toc.css
docs/bootstrap-toc.js
docs/docsearch.css
docs/docsearch.js
docs/index.html
docs/link.svg
docs/pkgdown.css
docs/pkgdown.js
docs/pkgdown.yml
docs/reference/Rplot001.png
docs/reference/acceptRate.html
docs/reference/bartClassifDiag.html
docs/reference/bartDiag.html
docs/reference/bartRegrDiag.html
docs/reference/bivariate_range.html
docs/reference/bivariate_scale.html
docs/reference/clusterTrees.html
docs/reference/combineDummy.html
docs/reference/combineFactors.html
docs/reference/combineFactorsDiag.html
docs/reference/combineFactorsInt.html
docs/reference/extractTreeData.html
docs/reference/getChildren.html
docs/reference/getObservations.html
docs/reference/get_stump_colour_for_legend.html
docs/reference/guide_colourfan.html
docs/reference/index.html
docs/reference/listOfTrees.html
docs/reference/localProcedure.html
docs/reference/mdsBart.html
docs/reference/node_depth.html
docs/reference/pal_vsup.html
docs/reference/permBART.html
docs/reference/permVimp.html
docs/reference/permVint.html
docs/reference/plotAllTrees.html
docs/reference/plotAllTreesPlotFn.html
docs/reference/plotProximity.html
docs/reference/plotSingleTree.html
docs/reference/plotTree.html
docs/reference/plotTrees.html
docs/reference/print.hideHelper.html
docs/reference/print.hideHelper1.html
docs/reference/proximityMatrix.html
docs/reference/sort_trees_by_depthMax.html
docs/reference/splitDensity.html
docs/reference/terminalFunction.html
docs/reference/train_bivariate.html
docs/reference/treeBarPlot.html
docs/reference/treeDepth.html
docs/reference/treeList.html
docs/reference/treeNodes.html
docs/reference/tree_dataframe.html
docs/reference/vimpBart.html
docs/reference/vimpPlot.html
docs/reference/vintBart.html
docs/reference/vintPlot.html
docs/reference/viviBart.html
docs/reference/viviBartMatrix.html
docs/reference/viviBartPlot.html
docs/reference/zip.html
man/acceptRate.Rd
man/bartClassifDiag.Rd
man/bartDiag.Rd
man/bartRegrDiag.Rd
man/bivariate_range.Rd
man/bivariate_scale.Rd
man/clusterTrees.Rd
man/combineDummy.Rd
man/extractTreeData.Rd
man/getChildren.Rd
man/getObservations.Rd
man/get_stump_colour_for_legend.Rd
man/guide_colourfan.Rd
man/input_data.Rd
man/localProcedure.Rd
man/mdsBart.Rd
man/node_depth.Rd
man/pal_vsup.Rd
man/permVimp.Rd
man/permVint.Rd
man/plotProximity.Rd
man/plotSingleTree.Rd
man/plotTrees.Rd
man/print.hideHelper1.Rd
man/proximityMatrix.Rd
man/sort_trees_by_depthMax.Rd
man/splitDensity.Rd
man/terminalFunction.Rd
man/train_bivariate.Rd
man/treeBarPlot.Rd
man/treeDepth.Rd
man/treeList.Rd
man/treeNodes.Rd
man/tree_data_example.Rd
man/tree_dataframe.Rd
man/vimpBart.Rd
man/vimpPlot.Rd
man/vintPlot.Rd
man/viviBART.Rd
man/viviBartMatrix.Rd
man/viviBartPlot.Rd