AleSR13/refsampr: Making QC report from Reference Samples (analyzed with Juno pipeline)
At the RIVM, we use the Juno_pipeline (https://github.com/AleSR13/Juno_pipeline) to do pre-processing and de novo assembly of bacterial isolates. Since 2020, we have also included a set of reference samples that let us monitor the quality of the data produced by the NGS sequencing facility. This package helps generating quality control (QC) reports for monitoring the quality of our data.
Getting started
Browse package contents
Package details |
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| Maintainer | |
| License | AGPL-3 + file LICENSE |
| Version | 0.3.2 |
| Package repository | View on GitHub |
| Installation |
Install the latest version of this package by entering the following in R:
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