loadAllenData: Loading Allen Data into R
In AlexanderAivazidis/AllenData: Loading Allen data into R.
Description
Usage
Arguments
Examples
Description
This function is an interface for loading RNA-seq data from the Allen institute into R
Usage
1
2
3
loadAllenData(cortical_area, species = "mouse",
normalization = "exon+intron_cpm",
directory = "/nfs/team205/aa16/AllenData/")
Arguments
cortical_area
The cortical area to load e.g. 'ALM'
species
The species for which to load the data e.g. human or mouse
normalization
Normalization method to use out of 'exon_rpkm' and 'exon+intron_cpm'
directory
Directory where the data is located
Examples
1
AlexanderAivazidis/AllenData documentation built on May 12, 2019, 3:09 p.m.
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Description Usage Arguments Examples
Description
This function is an interface for loading RNA-seq data from the Allen institute into R
Usage
1 2 3 | loadAllenData(cortical_area, species = "mouse",
normalization = "exon+intron_cpm",
directory = "/nfs/team205/aa16/AllenData/")
|
Arguments
cortical_area |
The cortical area to load e.g. 'ALM' |
species |
The species for which to load the data e.g. human or mouse |
normalization |
Normalization method to use out of 'exon_rpkm' and 'exon+intron_cpm' |
directory |
Directory where the data is located |
Examples
1 |
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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