AlexandrovLab/SigProfilerExtractorR: Extracts Mutational Signatures from Cancer Genomes and Decompose the Signatures into Global Signatures
SigProfilerExtractorR allows de novo extraction of mutational signatures from data generated in a matrix format. The tool identifies the number of operative mutational signatures, their activities in each sample, and the probability for each signature to cause a specific mutation type in a cancer sample. The tool makes use of SigProfilerMatrixGenerator, SigProfilerAssignment and SigProfilerPlotting.
Getting started
Browse package contents
Package details |
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| Author | S M Ashiqul Islam (Mishu) |
| Maintainer | Marcos Díaz-Gay <mdiazgay@health.ucsd.edu> |
| License | BSD 2-Clause License |
| Version | 1.1.17 |
| Package repository | View on GitHub |
| Installation |
Install the latest version of this package by entering the following in R:
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