Man pages for AliSajid/drugfindR
Investigate iLINCS for candidate repurposable drugs

consensusConcordantsGenerate a Consensus list of Targets *[Stable]*
dot-ilincsBaseUrlParameterize the base URL for the iLINCS API
dot-return_libraryReturn the internal iLINCS Library ID for a given library
dot-return_user_agentReturn a string suitable as a User-Agent for the iLINCS API
dot-validateLibraryCheck if the library is valid
drugfindR-packagedrugfindR: Drug Repurposing using Gene Expression Signatures
filterSignatureFilter the L1000 Signature *[Stable]*
getConcordantsGet Concordant Signatures from iLINCS *[Stable]*
getSignatureGet the L1000 Signature from iLINCS *[Stable]*
investigateSignatureInvestigate a given DGE dataset *[Stable]*
investigateTargetInvestigate a Given Gene or Drug *[Stable]*
loadMetadataLoad the correct metadata table
prepareSignaturePrepare an L1000 Signature froma given differential gene...
stopIfInvalidLibrariesStop if the libraries are invalid
targetRenameRename the Target-Related Columns
validateLibrariesCheck if the libraries input are valid
AliSajid/drugfindR documentation built on Dec. 19, 2024, 7:30 p.m.