Files in AlineTalhouk/diceR
Diverse Cluster Ensemble in R
.Rbuildignore
.covrignore
.github/.gitignore
.github/workflows/R-CMD-check.yaml
.github/workflows/rhub.yaml
.github/workflows/test-coverage.yaml
.gitignore
DESCRIPTION
LICENSE
LICENSE.md
NAMESPACE
NEWS.md
R/PAC.R
R/RcppExports.R
R/algorithms.R
R/consensus_cluster.R
R/consensus_combine.R
R/consensus_evaluate.R
R/consensus_funs.R
R/consensus_matrix.R
R/data.R
R/dice.R
R/diceR-package.R
R/external_validity.R
R/graphs.R
R/impute.R
R/pcn.R
R/prepare_data.R
R/sigclust.R
R/similarity.R
R/utils.R
R/zzz.R
README.Rmd
README.md
_pkgdown.yml
codecov.yml
cran-comments.md
data-raw/hgsc-raw.rda
data-raw/hgsc.R
data/hgsc.rda
diceR.Rproj
docs/404.html
docs/LICENSE-text.html
docs/LICENSE.html
docs/apple-touch-icon-120x120.png
docs/apple-touch-icon-152x152.png
docs/apple-touch-icon-180x180.png
docs/apple-touch-icon-60x60.png
docs/apple-touch-icon-76x76.png
docs/apple-touch-icon.png
docs/articles/index.html
docs/articles/overview.html
docs/articles/overview_files/figure-html/graph_heatmap-1.png
docs/authors.html
docs/deps/bootstrap-5.3.1/bootstrap.bundle.min.js
docs/deps/bootstrap-5.3.1/bootstrap.bundle.min.js.map
docs/deps/bootstrap-5.3.1/bootstrap.min.css
docs/deps/bootstrap-toc-1.0.1/bootstrap-toc.min.js
docs/deps/clipboard.js-2.0.11/clipboard.min.js
docs/deps/data-deps.txt
docs/deps/font-awesome-6.5.2/css/all.css
docs/deps/font-awesome-6.5.2/css/all.min.css
docs/deps/font-awesome-6.5.2/css/v4-shims.css
docs/deps/font-awesome-6.5.2/css/v4-shims.min.css
docs/deps/font-awesome-6.5.2/webfonts/fa-brands-400.ttf
docs/deps/font-awesome-6.5.2/webfonts/fa-brands-400.woff2
docs/deps/font-awesome-6.5.2/webfonts/fa-regular-400.ttf
docs/deps/font-awesome-6.5.2/webfonts/fa-regular-400.woff2
docs/deps/font-awesome-6.5.2/webfonts/fa-solid-900.ttf
docs/deps/font-awesome-6.5.2/webfonts/fa-solid-900.woff2
docs/deps/font-awesome-6.5.2/webfonts/fa-v4compatibility.ttf
docs/deps/font-awesome-6.5.2/webfonts/fa-v4compatibility.woff2
docs/deps/headroom-0.11.0/headroom.min.js
docs/deps/headroom-0.11.0/jQuery.headroom.min.js
docs/deps/jquery-3.6.0/jquery-3.6.0.js
docs/deps/jquery-3.6.0/jquery-3.6.0.min.js
docs/deps/jquery-3.6.0/jquery-3.6.0.min.map
docs/deps/search-1.0.0/autocomplete.jquery.min.js
docs/deps/search-1.0.0/fuse.min.js
docs/deps/search-1.0.0/mark.min.js
docs/favicon-16x16.png
docs/favicon-32x32.png
docs/favicon.ico
docs/index.html
docs/katex-auto.js
docs/lightswitch.js
docs/link.svg
docs/logo.png
docs/news/index.html
docs/pkgdown.js
docs/pkgdown.yml
docs/reference/CSPA.html
docs/reference/LCA.html
docs/reference/LCE.html
docs/reference/PAC.html
docs/reference/asrs.html
docs/reference/compactness.html
docs/reference/consensus_cluster.html
docs/reference/consensus_combine.html
docs/reference/consensus_evaluate.html
docs/reference/consensus_matrix.html
docs/reference/cts.html
docs/reference/dice.html
docs/reference/diceR-package.html
docs/reference/diceR.html
docs/reference/ev_confmat.html
docs/reference/ev_nmi.html
docs/reference/external_validity.html
docs/reference/figures/logo.png
docs/reference/figures/pipeline.png
docs/reference/graph_all.html
docs/reference/graph_cdf.html
docs/reference/graph_delta_area.html
docs/reference/graph_heatmap.html
docs/reference/graph_tracking.html
docs/reference/graphs-1.png
docs/reference/graphs-2.png
docs/reference/graphs-3.png
docs/reference/graphs-4.png
docs/reference/graphs-5.png
docs/reference/graphs.html
docs/reference/hgsc.html
docs/reference/impute_knn.html
docs/reference/impute_missing.html
docs/reference/index.html
docs/reference/k_modes.html
docs/reference/majority_voting.html
docs/reference/min_fnorm.html
docs/reference/pcn.html
docs/reference/pcn_select.html
docs/reference/pcn_simulate.html
docs/reference/prepare_data.html
docs/reference/relabel_class.html
docs/reference/sigclust.html
docs/reference/similarity.html
docs/reference/srs.html
docs/search.json
docs/sitemap.xml
man/CSPA.Rd
man/LCA.Rd
man/LCE.Rd
man/PAC.Rd
man/compactness.Rd
man/consensus_cluster.Rd
man/consensus_combine.Rd
man/consensus_evaluate.Rd
man/consensus_matrix.Rd
man/dice.Rd
man/diceR-package.Rd
man/external_validity.Rd
man/figures/logo.png
man/figures/pipeline.png
man/graphs.Rd
man/hgsc.Rd
man/impute_knn.Rd
man/impute_missing.Rd
man/k_modes.Rd
man/majority_voting.Rd
man/min_fnorm.Rd
man/pcn.Rd
man/prepare_data.Rd
man/relabel_class.Rd
man/sigclust.Rd
man/similarity.Rd
pkgdown/favicon/apple-touch-icon-120x120.png
pkgdown/favicon/apple-touch-icon-152x152.png
pkgdown/favicon/apple-touch-icon-180x180.png
pkgdown/favicon/apple-touch-icon-60x60.png
pkgdown/favicon/apple-touch-icon-76x76.png
pkgdown/favicon/apple-touch-icon.png
pkgdown/favicon/favicon-16x16.png
pkgdown/favicon/favicon-32x32.png
pkgdown/favicon/favicon.ico
revdep/.gitignore
revdep/README.md
revdep/cran.md
revdep/email.yml
revdep/failures.md
revdep/problems.md
src/.gitignore
src/RcppExports.cpp
src/connectivity_matrix.cpp
src/indicator_matrix.cpp
tests/testthat.R
tests/testthat/test-PAC.R
tests/testthat/test-consensus_cluster.R
tests/testthat/test-consensus_combine.R
tests/testthat/test-consensus_funs.R
tests/testthat/test-consensus_matrix.R
tests/testthat/test-dice.R
tests/testthat/test-external_validity.R
tests/testthat/test-graphs.R
tests/testthat/test-impute.R
tests/testthat/test-pcn.R
tests/testthat/test-prepare_data.R
tests/testthat/test-sigclust.R
tests/testthat/test-similarity.R
tests/testthat/test-utils.R
vignettes/overview.Rmd
