intervalHeatmap: Interval heatmap

In AngelCampos/m.shortcuts: Miguels shortcuts

Interval heatmap

Description

Plots the mean value of a value Z when divided into groups defined by intervals at variables X and Y

Usage

intervalHeatmap(
  x,
  y,
  z,
  x_n,
  y_n,
  nCores = 1,
  dig.lab = 1,
  outputMatrix = FALSE,
  dispNum = TRUE,
  na.rm = TRUE,
  FUN = "mean"
)

Arguments

x	numeric. X dimension
y	numeric. Y dimension
z	logical or numeric. Z dimension to be summarized
x_n	numeric. Number of groups for x dimension to be cut into
y_n	numeric. Number of groups for y dimension to be cut into
nCores	numeric. Number of cores to use to process data
dig.lab	numeric. Number of decimal positions to place in labels
outputMatrix	logical. Set to TRUE to output instead the matrix
dispNum	logical. Set to FALSE for not showing the numeric labels at each cell
na.rm	logical. Indicating if NA values should be removed to calculate mean Z. Default: TRUE.
FUN	character. Name of function to be used over the values that fall inside the combinations of x and y intervals. e.g. "mean" or "sum".

Value

matrix / pheatmap

Examples

intervalHeatmap(x = iris$Sepal.Length, y = iris$Sepal.Width,
                z = rep(1, nrow(iris)), x_n = 5, y_n = 5, FUN = "sum")

AngelCampos/m.shortcuts documentation built on Feb. 25, 2024, 4:06 a.m.