R/data.R

In Antoiulia/COSMONETOmegaData: Data for screening-network Cox methods for survival analysis

#' @exportPattern "."
#' @name OmegaGSE_BREAST
#' @title Omega adjacency matrix for GEO datasets
#'
#' @description Adjacency matrix with zero diagonal and non-negative off-diagonal to calculate Laplacian matrix.
#' The data includes also the list of common and non-common genes obtained by overlapping the associated disease-genes and the genes of the expression matrix.
#' @docType data
#'
#' @usage data(OmegaGSE_BREAST)
#'
#' @format Object of class \code{matrix}.
#'
#' @keywords datasets
#'
#' @source Human base, <https://hb.flatironinstitute.org>
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#' @name OmegaTCGA_BRCA
#' @title Omega adjacency matrix for TCGA datasets
#'
#' @description Adjacency matrix with zero diagonal and non-negative off-diagonal to calculate Laplacian matrix.
#' The data includes also the list of common and non-common genes obtained by overlapping the associated disease-genes and the genes of the count matrix.
#' @docType data
#'
#' @usage data(OmegaTCGA_BRCA)
#'
#' @format Object of class \code{matrix}.
#'
#' @keywords datasets
#'
#' @source Human base, <https://hb.flatironinstitute.org>
NULL