Man pages for ArdernHB/GeoOrigins
Spatial exploration of trait boundaries and provenance
| Array2Mat | Simple function for conversion of an array to a matrix |
| BoundaryCalculation | Internal function for identifying boundaries from spatial... |
| BoundaryFinder | Returns geographic boundaries identified from trait distances |
| BoundaryFinderPar | Returns geographic boundaries identified from trait distances... |
| chr2nu | Internal function for quick class change of a vector to... |
| Construct_contour | Internal function: Constructing smooth contour polygon |
| Fteydea | _Fringilla teydea_ song dataset |
| GeoDist2Point | Returns vector of Haversine distances |
| GeoDist2PointTable | Returns a table of Haversine distances |
| GeoOrigins | GeoOrigins: functions for spatial exploration of trait... |
| HeatMapping | Heat mapping function to identify region of highest value |
| HeatMappingPerm | Heat mapping function to identify region of highest value... |
| IDbyDistanceDistInput | Spatially provenance a specimen from distance data |
| IDbyDistanceDistInputCCV | Spatial Provenancing Correct Cross-Validation calculation... |
| IDbyDistanceDistInputCCVPar | Spatial Provenancing Correct Cross-Validation calculation... |
| IDbyDistanceDistInputPar | Spatially provenance a specimen from distance data adapted... |
| IDbyDistanceRawData | Spatially provenance a specimen from raw trait data |
| IDbyDistanceRawDataCCV | Spatial Provenancing Correct Cross-Validation calculation... |
| IDbyDistanceRawDataCCVPar | Spatial Provenancing Correct Cross-Validation calculation... |
| IDbyGridMeanRawData | Spatially provenance a specimen to a grid cell by nearest... |
| Marvalis | _Microtus arvalis_ shape dataset |
| Mat2Array | Simple function for conversion of a matrix of landmarks to an... |
| PermArraySig | Internal function: Comparison of permutation array with true... |
| PlotBoundaries | Plots map with boundaries from data dump folder or R object |
| ProcDistanceTable | Wrapper for procdist function to output a distance table |
| ProcDistanceTablePar | Wrapper for procdist function to output a distance table... |
| Rpraetor | _Rattus praetor_ shape dataset |
| TraitBoundaryStats | Calculates trait boundary overlaps and statistics from... |
| TraitBoundaryStatsPar | Parallel processing calculation of trait boundary overlaps... |
| transpar | Internal function: Transparent named colour |
| TwoLocationTest | Two location permutation significance signficance test |
| UserInputAssessment | Internal function for assessment of user input |
