API for ArnaudDroitLab/GenomicIntersection
GenomicOperations
| Global functions | |
|---|---|
| GenomicEnrichment | Man page Source code |
| GenomicEnrichment-class | Man page |
| GenomicOverlaps | Man page Source code |
| GenomicOverlaps-class | Man page |
| collapse_regions | Man page Source code |
| combined_regions,GenomicOverlaps-method | Man page |
| combined_regions<-,GenomicOverlaps,GRanges-method | Man page |
| consensus_indices | Man page Source code |
| consensus_regions | Man page Source code |
| coverage_df | Man page Source code |
| coverage_plot | Man page Source code |
| enrichment_df | Man page Source code |
| enrichment_plot | Man page Source code |
| import_column | Source code |
| initial_regions,GenomicOverlaps-method | Man page |
| intersect_indices | Man page Source code |
| intersect_matrix | Man page Source code |
| intersect_regions | Man page Source code |
| length,GenomicEnrichment-method | Man page |
| length,GenomicOverlaps-method | Man page |
| metric_df | Source code |
| metric_matrix | Source code |
| names,GenomicEnrichment-method | Man page |
| names,GenomicOverlaps-method | Man page |
| names<-,GenomicEnrichment,character-method | Man page |
| names<-,GenomicOverlaps,character-method | Man page |
| pairwise_overlap | Man page Source code |
| partition_levels | Source code |
| plot_genomic_enrichment_metric | Source code |
| plot_venn | Man page Source code |
| preprocess_indices | Source code |
| project_ranges | Man page Source code |
| proportion_df | Man page Source code |
| proportion_plot | Man page Source code |
| single_region_enrichment | Man page Source code |
| union_indices | Man page Source code |
| union_regions | Man page Source code |
