Description Usage Arguments Details Value Examples
This function will add metadata to the blast results.
1 | annotate_blast(blast_out, metadata, dir = ".")
|
blast_out |
The filename of the blast results |
metadata |
The subset of the metadata obtained with the
|
dir |
The directory where the fasta files are located. |
The blast results must contain an header with the following columns:
qseqid
sseqid
evalue
qlen
qlen
pident
qcovs
length
sstart
send
A data.frame
with the annotated results
1 2 3 4 5 | ## Not run:
metadata <- get_demo_metadata()
annotate_blast("test.out", metadata, dir = ".")
## End(Not run)
|
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