SampleOverlapMatrix: An example data of sample-overlap matrices.

In ArunabhaCodes/CPBayes: Bayesian Meta Analysis for Studying Cross-Phenotype Genetic Associations

Description

An example data of sample-overlap matrices for five different diseases in the Kaiser GERA cohort (a real data). SampleOverlapMatrix is a list that contains an example of the sample overlap matrices for five different diseases in the Kaiser GERA cohort. SampleOverlapMatrix$n11 provides the number of cases shared between all possible pairs of diseases. SampleOverlapMatrix$n00 provides the number of controls shared between all possible pairs of diseases. SampleOverlapMatrix$n10 provides the number of subjects who are case for one disease and control for another disease.

Usage

data(SampleOverlapMatrix)

Format

A list consisting of three integer square matrices (each of dimension 5 by 5):

n11

number of cases shared between all possible pairs of diseases.

n00

number of controls shared between all possible pairs of diseases.

n10

number of subjects who are case for one disease and control for another disease.

Examples

data(SampleOverlapMatrix)
n11 <- SampleOverlapMatrix$n11
n11
n00 <- SampleOverlapMatrix$n00
n00
n10 <- SampleOverlapMatrix$n10
n10
estimate_corln(n11,n00,n10)

ArunabhaCodes/CPBayes documentation built on Dec. 2, 2020, 10:22 p.m.