CHANGELOG.md

In AstraZeneca/Tendril: Compute and Display Tendril Plots

Changelog

• Version 2.0.4 (31 January 2020)

  • Fixes for CRAN
    • Renamed test file to consider case
    • Fixed the order of evaluation of the passed variable in is.not.positive.integer

    • 101 Removed stochastic test

• Version 2.0.3 (30 January 2020)

  • Changed maintainer from Martin Karpefors to Stefano Borini
  • Minor fixes to documentation

• Version 2.0.2 (22 January 2020)

  • 98 Fixed missing FDR.tot in other coloring scale selections.

• Version 2.0.1 (21 January 2020)

  • 94 Fixed label p-value to log(p-val)

  • 95 Fixed incorrect scale for limited tendril plotting.

  • 96 Add FDR.tot for coloring

• Version 2.0.0 (13 January 2020)

  • 63 Update TendrilPerm and TendrilPi functions to output only relevent data

  • 61 Typo in Tendril object element

  • 62 Update Tendril function to retain other input data

  • 67 Updated vignette for Tendril package

  • 69 Fix tests that are currently failing

  • 75 Added error message for plotting with an unexisting term

  • 19 Tendril.cx should return information without modifying data in place (Fixed as #76 Cleanup of code and documentation of behavior)

  • 21 Remove usage of dots in non S3 methods

  • 72 plot_timeseries problems (incorrect indexing leads to wrong data being plotted)

  • 73 Interactive plot color palette (should matching non-interactive one)

  • 87 Removed internal opacity term

• Version 0.8.0 (14 Oct 2019)

  • 59 Add Frequency to hover text

  • 57 Time series of net event

  • 56 Corrected colouring on percentile and permutation plots for Terms, rdiff, RR and OR

  • 55 Change colouring in perm perc.

  • 54 Allow single, multiple or all tendrils to be plotted

  • 52 Changed ggplot2 options to be consistent with plotbasic

  • 51 Various plot changes for consistency and minor cosmetics

  • 46 Introduces the timeseries function to plot a timeseries plot of net event

  • 43 Create separate percentile object and plot function

  • 42 Added scaling of markers according to appropriate range of termscount

  • 41 Added interactive option to plot using plotly or ggplot2

  • 40 Show left and right labels in the plots

  • 36 Pinned to R version 3.5 or above

  • Various cleanups and refactorings (#29, #1, #32, #34, #35, #37, #38, #44, #58)

• Version 0.7 (1 Oct 2019)

  • First public release

AstraZeneca/Tendril documentation built on May 27, 2022, 10:07 p.m.